RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 NOL4LQ96MY1 436 aaPredicted RBP7.11□□□□□ -1.27
SF3A1-206ENST00000471037 AIFM2Q9BRQ8 373 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 MED28Q9H204 178 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 COMMD9Q9P000 198 aa7.11□□□□□ -1.27
SF3A1-206ENST00000471037 DBX1A6NMT0 343 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 C3orf84H3BNL1 204 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 S1PR2O95136 353 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 CRYZL1O95825 349 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 HRASP01112 189 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 IFNA21P01568 189 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 TRAPPC2P0DI81 140 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 TRAPPC2BP0DI82 140 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 TMEM11P17152 192 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 LPAR6P43657 344 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 BRWD1-AS2P59051 145 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 RRAS2P62070 204 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-206ENST00000471037 TMEM177Q53S58 311 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 TMEM268Q5VZI3 342 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 SLC35E3Q7Z769 313 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 FOXRED2Q8IWF2 684 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 SELENOHQ8IZQ5 122 aaKnown RBP7.1□□□□□ -1.27
SF3A1-206ENST00000471037 STPG2Q8N412 459 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 UXS1Q8NBZ7 420 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 LHFPL5Q8TAF8 219 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 OSR1Q8TAX0 266 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-206ENST00000471037 FLYWCH2Q96CP2 140 aaKnown RBP7.1□□□□□ -1.27
SF3A1-206ENST00000471037 RAX2Q96IS3 184 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 RNF5Q99942 180 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 TMED3Q9Y3Q3 217 aa7.1□□□□□ -1.27
SF3A1-206ENST00000471037 TNCP24821 2201 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 hCG_2014768A0A024R1R8 64 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 IGHV3-72A0A0B4J1Y9 119 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 A0A1B0GVG6 124 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 CCL24O00175 119 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 SHOXO15266 292 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 IGKV1-39P01597 117 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 IGKV1-16P04430 117 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 IGKV1D-39P04432 117 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 SULT1A3P0DMM9 295 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 SULT1A4P0DMN0 295 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 NQO2P16083 231 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 HLA-GP17693 338 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 VDAC1P21796 283 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 BCAP31P51572 246 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 AKR1C2P52895 323 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 ERVK-16P61578 105 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 EBI3Q14213 229 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 HES1Q14469 280 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 POU2AF1Q16633 256 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 LIN54Q6MZP7 749 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 TEX38Q6PEX7 206 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 FAM219AQ8IW50 185 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 CADM3Q8N126 398 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 SLC35G3Q8N808 338 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 RNF152Q8N8N0 203 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 OR2T10Q8NGZ9 312 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 RNASE11Q8TAA1 199 aaKnown RBP7.09□□□□□ -1.27
SF3A1-206ENST00000471037 CHAC2Q8WUX2 184 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 LSM10Q969L4 123 aaKnown RBP7.09□□□□□ -1.27
SF3A1-206ENST00000471037 RRNAD1Q96FB5 475 aaKnown RBP7.09□□□□□ -1.27
SF3A1-206ENST00000471037 HARBI1Q96MB7 349 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 SPIN2AQ99865 258 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 SPIN2BQ9BPZ2 258 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 PRR13Q9NZ81 148 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 LINC00527Q9UJ94 153 aa7.09□□□□□ -1.27
SF3A1-206ENST00000471037 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.28
SF3A1-206ENST00000471037 HMX3A6NHT5 357 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 MARCH11A6NNE9 402 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 AP4M1O00189 453 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 GOSR2O14653 212 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 SPDEFO95238 335 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 MOSP00540 346 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 KRASP01116 189 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 IGKV1D-33P01593 117 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 IGKV1-33P01594 117 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 HOXB5P09067 269 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 SLC25A6P12236 298 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 CDX1P47902 265 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-206ENST00000471037 LGALS7P47929 136 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 RPS16P62249 146 aaKnown RBP7.08□□□□□ -1.28
SF3A1-206ENST00000471037 FCN2Q15485 313 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 C9orf66Q5T8R8 295 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 LCE2DQ5TA82 110 aaPredicted RBP7.08□□□□□ -1.28
SF3A1-206ENST00000471037 GGNBP1Q5YKI7 109 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 LYZL2Q7Z4W2 148 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 OR5M8Q8NGP6 311 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 ASB13Q8WXK3 278 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 SEC22AQ96IW7 307 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 DUX3Q96PT4 197 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 TSNAXQ99598 290 aaKnown RBP7.08□□□□□ -1.28
SF3A1-206ENST00000471037 GON7Q9BXV9 100 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 MGAT4CQ9UBM8 478 aa7.08□□□□□ -1.28
SF3A1-206ENST00000471037 DYNC2H1Q8NCM8 4307 aaKnown RBP7.08□□□□□ -1.28
SF3A1-206ENST00000471037 C5orf51A6NDU8 294 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 ADAP1O75689 374 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 IGKV1-5P01602 117 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 RPLP1P05386 114 aaKnown RBP7.07□□□□□ -1.28
SF3A1-206ENST00000471037 ELANEP08246 267 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 P0C879 139 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 G6PCP35575 357 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms