RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 H1FOOQ8IZA3 346 aaPredicted RBP4.47□□□□□ -1.69
VARS-222ENST00000470953 ZNF645Q8N7E2 425 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 TCTEX1D1Q8N7M0 179 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 SAMD12Q8N8I0 201 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 ZNF383Q8NA42 475 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 BVESQ8NE79 360 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 BEST4Q8NFU0 473 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 NPBQ8NG41 125 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 OR5AN1Q8NGI8 311 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 OR4S2Q8NH73 311 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 LRRC20Q8TCA0 184 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 SECTM1Q8WVN6 248 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 C4orf3Q8WVX3 66 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 TCTEX1D2Q8WW35 142 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 ACOT12Q8WYK0 555 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 MARC2Q969Z3 335 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 S100A16Q96FQ6 103 aaKnown RBP4.47□□□□□ -1.69
VARS-222ENST00000470953 OR5B12Q96R08 314 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 RNF5Q99942 180 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 WDR12Q9GZL7 423 aaKnown RBP4.47□□□□□ -1.69
VARS-222ENST00000470953 PLSCR3Q9NRY6 295 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 SDHAF2Q9NX18 166 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 ANXA10Q9UJ72 324 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 ZNF580Q9UK33 172 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 VSIG4Q9Y279 399 aa4.47□□□□□ -1.69
VARS-222ENST00000470953 C13orf42A0A1B0GVH6 325 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 MEIS3P1A6NDR6 274 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 FCGR3BO75015 233 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 IGHG4P01861 327 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 TRGV3P03979 118 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 TRAPPC2P0DI81 140 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 TRAPPC2BP0DI82 140 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 S100GP29377 79 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 LGALS7P47929 136 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 NKX2-5P52952 324 aaPredicted RBP4.46□□□□□ -1.7
VARS-222ENST00000470953 TAS2R46P59540 309 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 CX3CL1P78423 397 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 NDPQ00604 133 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 CATR1Q13166 79 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 FXYD3Q14802 87 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 PSG5Q15238 335 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 TNXAQ16473 311 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 LBHQ53QV2 105 aaPredicted RBP4.46□□□□□ -1.7
VARS-222ENST00000470953 PXDC1Q5TGL8 231 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 CNIH2Q6PI25 160 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 CEMP1Q6PRD7 247 aaPredicted RBP4.46□□□□□ -1.7
VARS-222ENST00000470953 Q6ZS49 121 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 POC5Q8NA72 575 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 OR11H1Q8NG94 326 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 OR13F1Q8NGS4 319 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 OR5H6Q8NGV6 325 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 OR5H2Q8NGV7 314 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 DCUN1D4Q92564 292 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 AP3S1Q92572 193 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 SLC25A38Q96DW6 304 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 RITA1Q96K30 269 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 HSD17B10Q99714 261 aaKnown RBP4.46□□□□□ -1.7
VARS-222ENST00000470953 BCL7BQ9BQE9 202 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 AGMATQ9BSE5 352 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 FAM103A1Q9BTL3 118 aaKnown RBP4.46□□□□□ -1.7
VARS-222ENST00000470953 COA4Q9NYJ1 87 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 TAS2R8Q9NYW2 309 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 EHFQ9NZC4 300 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 ELF5Q9UKW6 265 aaPredicted RBP4.46□□□□□ -1.7
VARS-222ENST00000470953 OR2W1Q9Y3N9 320 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 FSIP2Q5CZC0 6907 aa4.46□□□□□ -1.7
VARS-222ENST00000470953 IGKV1D-8A0A087WSZ0 117 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 J3KRW8 73 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 TNFSF12O43508 249 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 XRCC3O43542 346 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 IGHV3-11P01762 117 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 APELAP0DMC3 54 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 PSMB8P28062 276 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 FCGR2CP31995 323 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 TGFBR1P36897 503 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 KIR2DS2P43631 304 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 CDX1P47902 265 aaPredicted RBP4.45□□□□□ -1.7
VARS-222ENST00000470953 TAS2R20P59543 309 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 ERVK-16P61578 105 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 NCS1P62166 190 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 ZNF616Q08AN1 781 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 ZNF846Q147U1 533 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 AADACL3Q5VUY0 350 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 LFNGQ8NES3 379 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 OR4D10Q8NGI6 311 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 OR1N2Q8NGR9 330 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 VSTM2AQ8TAG5 236 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 OSR1Q8TAX0 266 aaPredicted RBP4.45□□□□□ -1.7
VARS-222ENST00000470953 CASTOR1Q8WTX7 329 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 S100ZQ8WXG8 99 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 SLC25A46Q96AG3 418 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 KCTD12Q96CX2 325 aaKnown RBP4.45□□□□□ -1.7
VARS-222ENST00000470953 YIPF6Q96EC8 236 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 UBE2E2Q96LR5 201 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 MS4A10Q96PG2 267 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 FUNDC2Q9BWH2 189 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 TINAGL1Q9GZM7 467 aaPredicted RBP4.45□□□□□ -1.7
VARS-222ENST00000470953 SLC5A7Q9GZV3 580 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 AUNIPQ9H7T9 357 aa4.45□□□□□ -1.7
VARS-222ENST00000470953 HRASLSQ9HDD0 168 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms