RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 LINC00473A8K010 186 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 ZNF705EA8MWA4 302 aaPredicted RBP4.95□□□□□ -1.62
SF3A3-205ENST00000470585 SLC17A2O00624 439 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 BET1O15155 118 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 SOCS1O15524 211 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 WBP4O75554 376 aaKnown RBP4.95□□□□□ -1.62
SF3A3-205ENST00000470585 CD74P04233 296 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 FCGR3AP08637 254 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 CD3GP09693 182 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 SPP1P10451 314 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 RPL35AP18077 110 aaKnown RBP4.95□□□□□ -1.62
SF3A3-205ENST00000470585 PSMD7P51665 324 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 TMEM50BP56557 158 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 WNT4P56705 351 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 PAFAH1B2P68402 229 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 TNP2Q05952 138 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 ZIK1Q3SY52 487 aaPredicted RBP4.95□□□□□ -1.62
SF3A3-205ENST00000470585 RNF212Q495C1 297 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 C10orf55Q5SWW7 151 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 MORN3Q6PF18 240 aaPredicted RBP4.95□□□□□ -1.62
SF3A3-205ENST00000470585 Q6ZR54 194 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 KCTD9Q7L273 389 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 LRRTM1Q86UE6 522 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 H1FOOQ8IZA3 346 aaPredicted RBP4.95□□□□□ -1.62
SF3A3-205ENST00000470585 CADM3Q8N126 398 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 CBR4Q8N4T8 237 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 C5orf30Q96GV9 206 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 CMTM3Q96MX0 182 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 GINS4Q9BRT9 223 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 HDHD3Q9BSH5 251 aaPredicted RBP4.95□□□□□ -1.62
SF3A3-205ENST00000470585 NDUFAF3Q9BU61 184 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 PECRQ9BY49 303 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 KRTAP4-5Q9BYR2 181 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 BET1LQ9NYM9 111 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 UBQLN2Q9UHD9 624 aa4.95□□□□□ -1.62
SF3A3-205ENST00000470585 FAT2Q9NYQ8 4349 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 TEX48A0A1B0GUV7 120 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 MFSD2BA6NFX1 497 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 HMX3A6NHT5 357 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 RBFOX2O43251 390 aaKnown RBP eCLIP4.94□□□□□ -1.622e-6■□□□□ 9.5
SF3A3-205ENST00000470585 FCGR3BO75015 233 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 CIB2O75838 187 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 S1PR2O95136 353 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 CA1P00915 261 aaPredicted RBP4.94□□□□□ -1.62
SF3A3-205ENST00000470585 UCHL1P09936 223 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 AREGP15514 252 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 HLA-GP17693 338 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 DTYMKP23919 212 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 HLA-DMBP28068 263 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 GPR183P32249 361 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 RELQ04864 619 aaPredicted RBP4.94□□□□□ -1.62
SF3A3-205ENST00000470585 POU2AF1Q16633 256 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 ACSM3Q53FZ2 586 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 OR10K2Q6IF99 312 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 ZNF66Q6ZN08 573 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 Q8N1X5 172 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 ZNF555Q8NEP9 628 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 DGCR14Q96DF8 476 aaKnown RBP4.94□□□□□ -1.62
SF3A3-205ENST00000470585 ARHGAP5-AS1Q96IT6 56 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 OR10C1Q96KK4 312 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 DCUN1D5Q9BTE7 237 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 AASSQ9UDR5 926 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 SMPXQ9UHP9 88 aa4.94□□□□□ -1.62
SF3A3-205ENST00000470585 RBMX2Q9Y388 322 aaKnown RBP4.94□□□□□ -1.62
SF3A3-205ENST00000470585 A0A1B0GW64 132 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 A0A1W2PPK0 400 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 IGLC7A0M8Q6 106 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 MYL12BO14950 172 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 HLA-DQB1P01920 261 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 CTSDP07339 412 aaPredicted RBP4.93□□□□□ -1.62
SF3A3-205ENST00000470585 GADD45AP24522 165 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 NPY1RP25929 384 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 ST3GAL4Q11206 333 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 KCTD21Q4G0X4 260 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 HSD17B12Q53GQ0 312 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 IGSF11Q5DX21 431 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 RBM48Q5RL73 367 aaKnown RBP4.93□□□□□ -1.62
SF3A3-205ENST00000470585 GDPD1Q8N9F7 314 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 OR5B3Q8NH48 314 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 GIMAP1Q8WWP7 306 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 RAB3CQ96E17 227 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 GRAMD2BQ96HH9 432 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 CYYR1Q96J86 154 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 TXN2Q99757 166 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 QTRT1Q9BXR0 403 aaKnown RBP4.93□□□□□ -1.62
SF3A3-205ENST00000470585 C8orf4Q9NR00 106 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 CLEC2DQ9UHP7 191 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 RAB22AQ9UL26 194 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 OR2W1Q9Y3N9 320 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 AGRNO00468 2067 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
SF3A3-205ENST00000470585 DEFB131BA0A096LNP1 70 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 IGHV4-28A0A0C4DH34 117 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 IGHV7-4-1A0A0J9YVY3 117 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 CHEK1O14757 476 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 ARL6IP5O75915 188 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 IFNA21P01568 189 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 IFNA17P01571 189 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 IGHV3-23P01764 117 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 H2AFB1P0C5Y9 115 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms