RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 F6UZH7 168 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 IGF2P01344 180 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 TDGF1P13385 188 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 RPS3P23396 243 aaKnown RBP eCLIP2.7□□□□□ -1.98
COL11A1-208ENST00000470170 IL3RAP26951 378 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 IMPA1P29218 277 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 CA7P43166 264 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 ZNF83P51522 516 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 TDGF1P3P51864 188 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 HIST1H1AQ02539 215 aaPredicted RBP2.7□□□□□ -1.98
COL11A1-208ENST00000470170 DHRS2Q13268 280 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 CST6Q15828 149 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 TMEM69Q5SWH9 247 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 LYRM7Q5U5X0 104 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 GLT8D1Q68CQ7 371 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 Q6Q795 121 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 DEFB128Q7Z7B8 93 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 BAP18Q8IXM2 172 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 TCTE3Q8IZS6 198 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 RNF182Q8N6D2 247 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 OR5H2Q8NGV7 314 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 SLC25A40Q8TBP6 338 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 TMEM158Q8WZ71 300 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 KLK6Q92876 244 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 OR2A5Q96R48 311 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 NRIP2Q9BQI9 281 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 SAMD10Q9BYL1 202 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 SMIM3Q9BZL3 60 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 LINC00470Q9BZP3 86 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 MED28Q9H204 178 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 CACYBPQ9HB71 228 aaKnown RBP2.7□□□□□ -1.98
COL11A1-208ENST00000470170 NIT2Q9NQR4 276 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 NAT8BQ9UHF3 227 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 ERG28Q9UKR5 140 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 HIGD1AQ9Y241 93 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 ZCCHC11Q5TAX3 1644 aaKnown RBP2.7□□□□□ -1.98
COL11A1-208ENST00000470170 KIF13AQ9H1H9 1805 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 SRCAPQ6ZRS2 3230 aa2.7□□□□□ -1.98
COL11A1-208ENST00000470170 BCL9O00512 1426 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 FAM135BQ49AJ0 1406 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 SSH2Q76I76 1423 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 VPS8Q8N3P4 1428 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 KDM5BQ9UGL1 1544 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 A0A087WUU8 490 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 TRAV5A0A0B4J249 113 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 TRAV4A0A0B4J268 109 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 J3QRK9 145 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 OR2H2O95918 312 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 SMIM17P0DL12 118 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 SMIM10L2AP0DMW4 78 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 SMIM10L2BP0DMW5 78 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 BCL2P10415 239 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 POLR2IP36954 125 aaKnown RBP2.69□□□□□ -1.98
COL11A1-208ENST00000470170 CCR2P41597 374 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 ATP5G3P48201 142 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 AKR1D1P51857 326 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 HOXC5Q00444 222 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 PLCXD2Q0VAA5 305 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 ELOCQ15369 112 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 DNAJC24Q6P3W2 148 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 PRSS54Q6PEW0 395 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 CAMK2N1Q7Z7J9 78 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 LRP11Q86VZ4 500 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 EXOC3-AS1Q8N2X6 119 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 SLC22A24Q8N4F4 322 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 KRTCAP2Q8N6L1 136 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 RTN4IP1Q8WWV3 396 aaPredicted RBP2.69□□□□□ -1.98
COL11A1-208ENST00000470170 TRIB3Q96RU7 358 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 CCL13Q99616 98 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 ZNF436Q9C0F3 470 aaPredicted RBP2.69□□□□□ -1.98
COL11A1-208ENST00000470170 CXorf21Q9HAI6 301 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 TMEM38BQ9NVV0 291 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 TAC3Q9UHF0 121 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 NUFIP1Q9UHK0 495 aaKnown RBP2.69□□□□□ -1.98
COL11A1-208ENST00000470170 ZNF230Q9UIE0 474 aaPredicted RBP2.69□□□□□ -1.98
COL11A1-208ENST00000470170 DNAJC12Q9UKB3 198 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 MED31Q9Y3C7 131 aa2.69□□□□□ -1.98
COL11A1-208ENST00000470170 VIRMAQ69YN4 1812 aaKnown RBP2.69□□□□□ -1.98
COL11A1-208ENST00000470170 PLCH2O75038 1416 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 NOS1P29475 1434 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 CD109Q6YHK3 1445 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 SPEF2Q9C093 1822 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 TRAV9-1A0A075B6T8 112 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 TMEM72A0PK05 275 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 C4orf51C9J302 202 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 KRBOX1C9JBD0 128 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 CLDN25C9JDP6 229 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 M0R381 172 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 CD5LO43866 347 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 GNG7O60262 68 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 SLC25A14O95258 325 aaPredicted RBP2.68□□□□□ -1.98
COL11A1-208ENST00000470170 NRASP01111 189 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 SRIP30626 198 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 S100A11P31949 105 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 GABRA2P47869 451 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 PPP3R1P63098 170 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 RSPO1Q2MKA7 263 aaPredicted RBP2.68□□□□□ -1.98
COL11A1-208ENST00000470170 OCIAD2Q56VL3 154 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 EBLN2Q6P2I7 272 aa2.68□□□□□ -1.98
COL11A1-208ENST00000470170 GUSBP11Q6P575 273 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms