RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 TRGC1P0CF51 173 aa12.03□□□□□ -0.48
CBWD3-205ENST00000469687 NDUFB7P17568 137 aa12.03□□□□□ -0.48
CBWD3-205ENST00000469687 RPP30P78346 268 aaKnown RBP12.03□□□□□ -0.48
CBWD3-205ENST00000469687 ADIPOQQ15848 244 aa12.03□□□□□ -0.48
CBWD3-205ENST00000469687 Q8NA96 180 aa12.03□□□□□ -0.48
CBWD3-205ENST00000469687 NEIL1Q96FI4 390 aaPredicted RBP12.03□□□□□ -0.48
CBWD3-205ENST00000469687 DERL1Q9BUN8 251 aa12.03□□□□□ -0.48
CBWD3-205ENST00000469687 HINT2Q9BX68 163 aa12.03□□□□□ -0.48
CBWD3-205ENST00000469687 TMEM14BQ9NUH8 114 aa12.03□□□□□ -0.48
CBWD3-205ENST00000469687 AURKAIP1Q9NWT8 199 aaPredicted RBP12.03□□□□□ -0.48
CBWD3-205ENST00000469687 PXMP4Q9Y6I8 212 aa12.03□□□□□ -0.48
CBWD3-205ENST00000469687 POLEQ07864 2286 aa12.03□□□□□ -0.48
CBWD3-205ENST00000469687 TRGV8A0A0C4DH27 118 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 SRRM4A7MD48 611 aaKnown RBP12.02□□□□□ -0.48
CBWD3-205ENST00000469687 C16orf97H3BN30 126 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 PHOX2AO14813 284 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 THBDP07204 575 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 CT45A6P0DMU7 189 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 CT45A5P0DMU8 189 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 CT45A7P0DMV0 189 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 IRF2P14316 349 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 OPRK1P41145 380 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 TMPRSS3P57727 454 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 BSPH1Q075Z2 132 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 PDZD11Q5EBL8 140 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 TEX36Q5VZQ5 186 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 TMEM108Q6UXF1 575 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 OR5T1Q8NG75 326 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 RND1Q92730 232 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 TMEM204Q9BSN7 226 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 CTDSP1Q9GZU7 261 aa12.02□□□□□ -0.48
CBWD3-205ENST00000469687 TRBV24-1A0A075B6N3 115 aa12.02□□□□□ -0.49
CBWD3-205ENST00000469687 A0A1W2PPV4 95 aa12.02□□□□□ -0.49
CBWD3-205ENST00000469687 ZNF729A6NN14 1252 aaPredicted RBP12.02□□□□□ -0.49
CBWD3-205ENST00000469687 MKRN2OSH3BPM6 223 aa12.02□□□□□ -0.49
CBWD3-205ENST00000469687 PRRG2O14669 202 aa12.02□□□□□ -0.49
CBWD3-205ENST00000469687 ARL14EPLP0DKL9 152 aa12.02□□□□□ -0.49
CBWD3-205ENST00000469687 CDX1P47902 265 aaPredicted RBP12.02□□□□□ -0.49
CBWD3-205ENST00000469687 CST9LP1Q5W188 147 aa12.02□□□□□ -0.49
CBWD3-205ENST00000469687 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.02□□□□□ -0.49
CBWD3-205ENST00000469687 SLC24A4Q8NFF2 622 aa12.02□□□□□ -0.49
CBWD3-205ENST00000469687 FAM122AQ96E09 287 aa12.02□□□□□ -0.49
CBWD3-205ENST00000469687 RPUSD1Q9UJJ7 312 aaKnown RBP12.02□□□□□ -0.49
CBWD3-205ENST00000469687 FOXA2Q9Y261 457 aaPredicted RBP12.02□□□□□ -0.49
CBWD3-205ENST00000469687 LSM4Q9Y4Z0 139 aaKnown RBP12.02□□□□□ -0.49
CBWD3-205ENST00000469687 CA2P00918 260 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 PFN1P07737 140 aaKnown RBP12.01□□□□□ -0.49
CBWD3-205ENST00000469687 SOD3P08294 240 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 CCL3L1P16619 93 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 NPY1RP25929 384 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 HSPE1P61604 102 aaKnown RBP12.01□□□□□ -0.49
CBWD3-205ENST00000469687 GNB1P62873 340 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 PRR30Q53SZ7 412 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-205ENST00000469687 SLC25A48Q6ZT89 311 aaKnown RBP12.01□□□□□ -0.49
CBWD3-205ENST00000469687 OR13D1Q8NGV5 346 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 RAB1CQ92928 201 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 TCEAL7Q9BRU2 100 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 GGACTQ9BVM4 153 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 C17orf100A8MU93 164 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 MPDU1O75352 247 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 MOB3BQ86TA1 216 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 LINC00574Q9H8X3 128 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 RAB9BQ9NP90 201 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 OR51B2Q9Y5P1 312 aa12.01□□□□□ -0.49
CBWD3-205ENST00000469687 CEP295Q9C0D2 2601 aa12□□□□□ -0.49
CBWD3-205ENST00000469687 PGPEP1LA6NFU8 196 aa12□□□□□ -0.49
CBWD3-205ENST00000469687 SOX15O60248 233 aa12□□□□□ -0.49
CBWD3-205ENST00000469687 LY86O95711 162 aa12□□□□□ -0.49
CBWD3-205ENST00000469687 SPATA31B1PQ5VZV4 182 aa12□□□□□ -0.49
CBWD3-205ENST00000469687 CORO2AQ92828 525 aa12□□□□□ -0.49
CBWD3-205ENST00000469687 GSN-AS1Q9NRJ2 163 aa12□□□□□ -0.49
CBWD3-205ENST00000469687 SLC25A10Q9UBX3 287 aaPredicted RBP12□□□□□ -0.49
CBWD3-205ENST00000469687 H7BYZ3 331 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 NDUFB4O95168 129 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 IL6RP08887 468 aaPredicted RBP11.99□□□□□ -0.49
CBWD3-205ENST00000469687 GALR1P47211 349 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 B2MP61769 119 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 CDPF1Q6NVV7 123 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 GPR61Q9BZJ8 451 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 NPVFQ9HCQ7 196 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 SEPSECSQ9HD40 501 aaKnown RBP11.99□□□□□ -0.49
CBWD3-205ENST00000469687 SLC35D1Q9NTN3 355 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 FABP1P07148 127 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 STAG3L2P0CL84 134 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 STAG3L3P0CL85 134 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 NBL1P41271 181 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 POU2AF1Q16633 256 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 GFRALQ6UXV0 394 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 STPG3Q8N7X2 389 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 ZNF114Q8NC26 417 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 ADTRPQ96IZ2 230 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 PLXNB1O43157 2135 aa11.99□□□□□ -0.49
CBWD3-205ENST00000469687 hADV38S2A0JD32 116 aa11.98□□□□□ -0.49
CBWD3-205ENST00000469687 LINC00587B1AMM8 73 aa11.98□□□□□ -0.49
CBWD3-205ENST00000469687 HRASP01112 189 aa11.98□□□□□ -0.49
CBWD3-205ENST00000469687 IGFBP2P18065 325 aa11.98□□□□□ -0.49
CBWD3-205ENST00000469687 REG1BP48304 166 aa11.98□□□□□ -0.49
CBWD3-205ENST00000469687 RPL31P62899 125 aaKnown RBP11.98□□□□□ -0.49
CBWD3-205ENST00000469687 S100A12P80511 92 aa11.98□□□□□ -0.49
CBWD3-205ENST00000469687 PYY3Q5JQD4 70 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms