RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 RBMY1DP0C7P1 496 aaKnown RBP11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 HLA-GP17693 338 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 CBLN1P23435 193 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 POU2AF1Q16633 256 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 CLEC19AQ6UXS0 136 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 DEFB125Q8N687 156 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 AIFM2Q9BRQ8 373 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 SLC5A7Q9GZV3 580 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 PLEKHA3Q9HB20 300 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 DIABLOQ9NR28 239 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 SLC2A8Q9NY64 477 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 CEPT1Q9Y6K0 416 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 S4R3C0 116 aa11.14□□□□□ -0.63
SDCCAG3-209ENST00000468963 IGLV11-55A0A075B6I3 123 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 TRAV3A0A0B4J244 114 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 SULT1C2O00338 296 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 UPK2O00526 184 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 TMEM127O75204 238 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 HPRT1P00492 218 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 HIST1H1BP16401 226 aaKnown RBP11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 ARL3P36405 182 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 TAS2R31P59538 309 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 OR2B8PP59922 312 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 TIMM50Q3ZCQ8 353 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 OR5AP2Q8NGF4 316 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 DYNLRB2Q8TF09 96 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 EEF1AKMT3Q96AZ1 226 aa11.13□□□□□ -0.63
SDCCAG3-209ENST00000468963 TMEM213A2RRL7 107 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 OR11H12B2RN74 326 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 DHFRP00374 187 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 REG1AP05451 166 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 CLEC3BP05452 202 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 FCER2P06734 321 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 GNRHRP30968 328 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 CBX5P45973 191 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 NEDD8Q15843 81 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 FAM106AQ4KMX7 169 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 DHRS11Q6UWP2 260 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 ZNF818PQ6ZRF7 136 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 CACNG8Q8WXS5 425 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 WDR89Q96FK6 387 aaPredicted RBP11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 RETNQ9HD89 108 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 ALMS1Q8TCU4 4167 aa11.12□□□□□ -0.63
SDCCAG3-209ENST00000468963 BIRC6Q9NR09 4857 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 TRBV7-1A0A0A6YYK4 115 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 IGLC7A0M8Q6 106 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 XRCC3O43542 346 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 NQO2P16083 231 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 FXYD4P59646 89 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 GUCA2BQ16661 112 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 UXS1Q8NBZ7 420 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 CXorf58Q96LI9 332 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 SRSF8Q9BRL6 282 aaKnown RBP11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 WFDC10AQ9H1F0 79 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 PLEKHA2Q9HB19 425 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 HRASLSQ9HDD0 168 aa11.11□□□□□ -0.63
SDCCAG3-209ENST00000468963 ZNF320A2RRD8 509 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 MEIS3P1A6NDR6 274 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 MFSD2BA6NFX1 497 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 A8MWP6 167 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 FGF2P09038 288 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 C8orf88P0DMB2 117 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 DEFA4P12838 97 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 TGFBR1P36897 503 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 CATR1Q13166 79 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 KCTD21Q4G0X4 260 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 ZNF57Q68EA5 555 aaPredicted RBP11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 TMEM61Q8N0U2 210 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 ZNF502Q8TBZ5 544 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 CD300LFQ8TDQ1 290 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 S100A16Q96FQ6 103 aaKnown RBP11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 SRD5A3Q9H8P0 318 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 MLXQ9UH92 298 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 ANAPC10Q9UM13 185 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 SELENOKQ9Y6D0 94 aa11.1□□□□□ -0.63
SDCCAG3-209ENST00000468963 S1PR2O95136 353 aa11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 NAT1P18440 290 aa11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 PTBP1P26599 531 aaKnown RBP eCLIP11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 RPS19P39019 145 aaKnown RBP11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 TM4SF20Q53R12 229 aa11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 UNQ9165/PRO28630Q6UXU0 137 aa11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 CROCCP3Q8IVE0 287 aa11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 OR10W1Q8NGF6 305 aa11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 OR51H1Q8NH63 302 aa11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 FAM110AQ9BQ89 295 aa11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 COMMD5Q9GZQ3 224 aa11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 TMEM140Q9NV12 185 aa11.09□□□□□ -0.63
SDCCAG3-209ENST00000468963 TEX50A0A1B0GTY4 177 aa11.08□□□□□ -0.64
SDCCAG3-209ENST00000468963 PGLYRP1O75594 196 aaPredicted RBP11.08□□□□□ -0.64
SDCCAG3-209ENST00000468963 RFX2P48378 723 aa11.08□□□□□ -0.64
SDCCAG3-209ENST00000468963 AADACL3Q5VUY0 350 aa11.08□□□□□ -0.64
SDCCAG3-209ENST00000468963 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
SDCCAG3-209ENST00000468963 CADM3Q8N126 398 aa11.08□□□□□ -0.64
SDCCAG3-209ENST00000468963 QTRT1Q9BXR0 403 aaKnown RBP11.08□□□□□ -0.64
SDCCAG3-209ENST00000468963 ZNF436Q9C0F3 470 aaPredicted RBP11.08□□□□□ -0.64
SDCCAG3-209ENST00000468963 COMMD9Q9P000 198 aa11.08□□□□□ -0.64
SDCCAG3-209ENST00000468963 TRAPPC2P0DI81 140 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 TRAPPC2BP0DI82 140 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 RPA2P15927 270 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 F2RP25116 425 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms