RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 RPS19P39019 145 aaKnown RBP16.5■□□□□ 0.23
TTC28-204ENST00000468807 CTRB2Q6GPI1 263 aa16.5■□□□□ 0.23
TTC28-204ENST00000468807 ADAMTSL5Q6ZMM2 481 aa16.5■□□□□ 0.23
TTC28-204ENST00000468807 DMBX1Q8NFW5 382 aa16.5■□□□□ 0.23
TTC28-204ENST00000468807 FANCD2OSQ96PS1 177 aa16.5■□□□□ 0.23
TTC28-204ENST00000468807 CITED4Q96RK1 184 aa16.5■□□□□ 0.23
TTC28-204ENST00000468807 PLEKHA3Q9HB20 300 aa16.5■□□□□ 0.23
TTC28-204ENST00000468807 C2orf70A6NJV1 201 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 PMP2P02689 132 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 FOLR2P14207 255 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 HIST1H1BP16401 226 aaKnown RBP16.49■□□□□ 0.23
TTC28-204ENST00000468807 RFX2P48378 723 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 TAS2R20P59543 309 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 GUCA2BQ16661 112 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 HAGHQ16775 308 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 TSPAN14Q8NG11 270 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 CCDC140Q96MF4 163 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 SPATA25Q9BR10 227 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 COMMD5Q9GZQ3 224 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 DMRT1Q9Y5R6 373 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 SELENOKQ9Y6D0 94 aa16.49■□□□□ 0.23
TTC28-204ENST00000468807 RYR2Q92736 4967 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 A0A087WXM4 84 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 TRAV3A0A0B4J244 114 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 ZNF320A2RRD8 509 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 S1PR2O95136 353 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 MECP2P51608 486 aaKnown RBP16.48■□□□□ 0.23
TTC28-204ENST00000468807 OR2B8PP59922 312 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 OR5H2Q8NGV7 314 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 BORCS5Q969J3 196 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 YIPF6Q96EC8 236 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 NEURL2Q9BR09 285 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 ZNF2Q9BSG1 426 aaPredicted RBP16.48■□□□□ 0.23
TTC28-204ENST00000468807 ZC4H2Q9NQZ6 224 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 TMEM140Q9NV12 185 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 SLC2A8Q9NY64 477 aa16.48■□□□□ 0.23
TTC28-204ENST00000468807 STARD9Q9P2P6 4700 aa16.47■□□□□ 0.23
TTC28-204ENST00000468807 CGB1A6NKQ9 187 aa16.47■□□□□ 0.23
TTC28-204ENST00000468807 UPK2O00526 184 aa16.47■□□□□ 0.23
TTC28-204ENST00000468807 TPPPO94811 219 aa16.47■□□□□ 0.23
TTC28-204ENST00000468807 RLN1P04808 185 aa16.47■□□□□ 0.23
TTC28-204ENST00000468807 GNRHRP30968 328 aa16.47■□□□□ 0.23
TTC28-204ENST00000468807 DEFB114Q30KQ6 69 aa16.47■□□□□ 0.23
TTC28-204ENST00000468807 ZFAND6Q6FIF0 208 aa16.47■□□□□ 0.23
TTC28-204ENST00000468807 CD300LFQ8TDQ1 290 aa16.47■□□□□ 0.23
TTC28-204ENST00000468807 CACNG8Q8WXS5 425 aa16.47■□□□□ 0.23
TTC28-204ENST00000468807 ISOC1Q96CN7 298 aa16.47■□□□□ 0.23
TTC28-204ENST00000468807 IGLV11-55A0A075B6I3 123 aa16.46■□□□□ 0.23
TTC28-204ENST00000468807 MFSD2BA6NFX1 497 aa16.46■□□□□ 0.23
TTC28-204ENST00000468807 ERVK-16P61578 105 aa16.46■□□□□ 0.23
TTC28-204ENST00000468807 FAM106AQ4KMX7 169 aa16.46■□□□□ 0.23
TTC28-204ENST00000468807 GPHB5Q86YW7 130 aa16.46■□□□□ 0.23
TTC28-204ENST00000468807 CXorf58Q96LI9 332 aa16.46■□□□□ 0.23
TTC28-204ENST00000468807 PLEKHA2Q9HB19 425 aa16.46■□□□□ 0.23
TTC28-204ENST00000468807 SACSQ9NZJ4 4579 aa16.46■□□□□ 0.22
TTC28-204ENST00000468807 CSMD3Q7Z407 3707 aa16.45■□□□□ 0.22
TTC28-204ENST00000468807 LGALS9O00182 355 aa16.45■□□□□ 0.22
TTC28-204ENST00000468807 TNFAIP8O95379 198 aa16.45■□□□□ 0.22
TTC28-204ENST00000468807 CD7P09564 240 aa16.45■□□□□ 0.22
TTC28-204ENST00000468807 PRSS3P35030 304 aa16.45■□□□□ 0.22
TTC28-204ENST00000468807 TAS2R46P59540 309 aa16.45■□□□□ 0.22
TTC28-204ENST00000468807 POU2AF1Q16633 256 aa16.45■□□□□ 0.22
TTC28-204ENST00000468807 LAX1Q8IWV1 398 aa16.45■□□□□ 0.22
TTC28-204ENST00000468807 MOB3AQ96BX8 217 aa16.45■□□□□ 0.22
TTC28-204ENST00000468807 WDR89Q96FK6 387 aaPredicted RBP16.45■□□□□ 0.22
TTC28-204ENST00000468807 QTRT1Q9BXR0 403 aaKnown RBP16.45■□□□□ 0.22
TTC28-204ENST00000468807 TECRQ9NZ01 308 aaKnown RBP16.45■□□□□ 0.22
TTC28-204ENST00000468807 COMMD9Q9P000 198 aa16.45■□□□□ 0.22
TTC28-204ENST00000468807 TRBV7-1A0A0A6YYK4 115 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 IGLC7A0M8Q6 106 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 ZNF785A8K8V0 405 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 IFNA6P05013 189 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 CLEC3BP05452 202 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 CBLN1P23435 193 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 GPR183P32249 361 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 DHRS11Q6UWP2 260 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 DEFB125Q8N687 156 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 OR10W1Q8NGF6 305 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 HINT2Q9BX68 163 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 WFDC10AQ9H1F0 79 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 COMMD3Q9UBI1 195 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 CEPT1Q9Y6K0 416 aa16.44■□□□□ 0.22
TTC28-204ENST00000468807 PGLYRP1O75594 196 aaPredicted RBP16.43■□□□□ 0.22
TTC28-204ENST00000468807 HLA-DMAP28067 261 aa16.43■□□□□ 0.22
TTC28-204ENST00000468807 CMTM1Q8IZ96 169 aa16.43■□□□□ 0.22
TTC28-204ENST00000468807 SLC25A46Q96AG3 418 aa16.43■□□□□ 0.22
TTC28-204ENST00000468807 EDA2RQ9HAV5 297 aa16.43■□□□□ 0.22
TTC28-204ENST00000468807 RETNQ9HD89 108 aa16.43■□□□□ 0.22
TTC28-204ENST00000468807 THYN1Q9P016 225 aa16.43■□□□□ 0.22
TTC28-204ENST00000468807 ANAPC10Q9UM13 185 aa16.43■□□□□ 0.22
TTC28-204ENST00000468807 LYSTQ99698 3801 aa16.42■□□□□ 0.22
TTC28-204ENST00000468807 MARCH11A6NNE9 402 aa16.42■□□□□ 0.22
TTC28-204ENST00000468807 CYB5BO43169 146 aa16.42■□□□□ 0.22
TTC28-204ENST00000468807 EIF4EP06730 217 aaKnown RBP16.42■□□□□ 0.22
TTC28-204ENST00000468807 F2RP25116 425 aa16.42■□□□□ 0.22
TTC28-204ENST00000468807 HRH1P35367 487 aa16.42■□□□□ 0.22
TTC28-204ENST00000468807 LPAR6P43657 344 aa16.42■□□□□ 0.22
TTC28-204ENST00000468807 NCS1P62166 190 aa16.42■□□□□ 0.22
TTC28-204ENST00000468807 ZNF57Q68EA5 555 aaPredicted RBP16.42■□□□□ 0.22
TTC28-204ENST00000468807 OR6F1Q8NGZ6 308 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms