RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 CDRT1O95170 752 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 OR2C1O95371 312 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 HLA-DQB1P01920 261 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 CTSDP07339 412 aaPredicted RBP4.14□□□□□ -1.75
CXXC4-202ENST00000466963 IL6RP08887 468 aaPredicted RBP4.14□□□□□ -1.75
CXXC4-202ENST00000466963 PSMB9P28065 219 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 HLA-DMBP28068 263 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 TDRG1Q3Y452 100 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 UTF1Q5T230 341 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 SIGIRRQ6IA17 410 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 BTNL8Q6UX41 500 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 H1FOOQ8IZA3 346 aaPredicted RBP4.14□□□□□ -1.75
CXXC4-202ENST00000466963 JAGN1Q8N5M9 183 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 ZBTB8BQ8NAP8 495 aaPredicted RBP4.14□□□□□ -1.75
CXXC4-202ENST00000466963 FRZBQ92765 325 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 DERL3Q96Q80 235 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 TBX5Q99593 518 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 CMSS1Q9BQ75 279 aaKnown RBP4.14□□□□□ -1.75
CXXC4-202ENST00000466963 UPK3BQ9BT76 320 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 ZNF430Q9H8G1 570 aaPredicted RBP4.14□□□□□ -1.75
CXXC4-202ENST00000466963 PLEKHA2Q9HB19 425 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 AP4S1Q9Y587 144 aa4.14□□□□□ -1.75
CXXC4-202ENST00000466963 A0A0A6YYH2 397 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 A6NJ64 397 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 PDCD5O14737 125 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 NUPL2O15504 423 aaKnown RBP4.13□□□□□ -1.75
CXXC4-202ENST00000466963 ADAP1O75689 374 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 ATG12O94817 140 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 HPRT1P00492 218 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 INAFM2P0DMQ5 153 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 DEFA4P12838 97 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 GABRB1P18505 474 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 MFAP4P55083 255 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 ATP5IP56385 69 aaPredicted RBP4.13□□□□□ -1.75
CXXC4-202ENST00000466963 ODF4Q2M2E3 257 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 RPL39P5Q59GN2 51 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 NOXA1Q86UR1 476 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 GDPD1Q8N9F7 314 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 OR1L8Q8NGR8 309 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 PRNDQ9UKY0 176 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 DYNC1H1Q14204 4646 aaKnown RBP4.13□□□□□ -1.75
CXXC4-202ENST00000466963 B3GALNT1O75752 331 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 CA1P00915 261 aaPredicted RBP4.13□□□□□ -1.75
CXXC4-202ENST00000466963 TRAPPC2P0DI81 140 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 TRAPPC2BP0DI82 140 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 HTR2CP28335 458 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 TSPOP30536 169 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 ETV6P41212 452 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 NANOS2P60321 138 aaKnown RBP4.13□□□□□ -1.75
CXXC4-202ENST00000466963 MS4A2Q01362 244 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 C4orf46Q504U0 113 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 CNIH2Q6PI25 160 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 OR51A4Q8NGJ6 313 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 OR52I1Q8NGK6 324 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 LSM10Q969L4 123 aaKnown RBP4.13□□□□□ -1.75
CXXC4-202ENST00000466963 PLCXD1Q9NUJ7 323 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 C21orf62Q9NYP8 219 aa4.13□□□□□ -1.75
CXXC4-202ENST00000466963 RBMX2Q9Y388 322 aaKnown RBP4.13□□□□□ -1.75
CXXC4-202ENST00000466963 METTL21EPA6NDL7 271 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 SLC17A2O00624 439 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 OR2J3O76001 311 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 S100GP29377 79 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 CBX5P45973 191 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 ZNF600Q6ZNG1 722 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 PACRGLQ8N7B6 248 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 OR10K1Q8NGX5 313 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 OR1P1Q8NH06 330 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 NTN5Q8WTR8 489 aaPredicted RBP4.12□□□□□ -1.75
CXXC4-202ENST00000466963 TMEM80Q96HE8 168 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 QTRT1Q9BXR0 403 aaKnown RBP4.12□□□□□ -1.75
CXXC4-202ENST00000466963 COMMD5Q9GZQ3 224 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 A0A0B4J293 547 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 MEX3AA1L020 520 aaKnown RBP4.12□□□□□ -1.75
CXXC4-202ENST00000466963 ZNF320A2RRD8 509 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 OR2T8A6NH00 312 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 A6NJY4 79 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 CHEK1O14757 476 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 IGHV3-7P01780 117 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 IGKV1-16P04430 117 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 SAA1P0DJI8 122 aaPredicted RBP4.12□□□□□ -1.75
CXXC4-202ENST00000466963 NQO2P16083 231 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 NPBWR1P48145 328 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 ERVK-16P61578 105 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 QRFPP83859 136 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 CLEC19AQ6UXS0 136 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 CCDC197Q8NCU1 140 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 OR10AC1Q8NH08 325 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 CLCC1Q96S66 551 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 FAM103A1Q9BTL3 118 aaKnown RBP4.12□□□□□ -1.75
CXXC4-202ENST00000466963 OR2W1Q9Y3N9 320 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 F11RQ9Y624 299 aaKnown RBP4.12□□□□□ -1.75
CXXC4-202ENST00000466963 TRAV14DV4A0A0A6YYC5 116 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 UBE2QL1A1L167 161 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 TRBV12-3P01733 135 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 ALPLP05186 524 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 CLEC3BP05452 202 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 RPL5P46777 297 aaKnown RBP4.12□□□□□ -1.75
CXXC4-202ENST00000466963 HAPLN4Q86UW8 402 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 IL1F10Q8WWZ1 152 aa4.12□□□□□ -1.75
CXXC4-202ENST00000466963 CIB1Q99828 191 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms