RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 RPL8P62917 257 aaKnown RBP15.38■□□□□ 0.05
COL6A1-203ENST00000466285 SLC25A42Q86VD7 318 aa15.38■□□□□ 0.05
COL6A1-203ENST00000466285 SPARTQ8N0X7 666 aa15.38■□□□□ 0.05
COL6A1-203ENST00000466285 OR13F1Q8NGS4 319 aa15.38■□□□□ 0.05
COL6A1-203ENST00000466285 OVOL2Q9BRP0 275 aa15.38■□□□□ 0.05
COL6A1-203ENST00000466285 TECRQ9NZ01 308 aaKnown RBP15.38■□□□□ 0.05
COL6A1-203ENST00000466285 BLOC1S6Q9UL45 172 aa15.38■□□□□ 0.05
COL6A1-203ENST00000466285 SULT1C2O00338 296 aa15.37■□□□□ 0.05
COL6A1-203ENST00000466285 HLA-GP17693 338 aa15.37■□□□□ 0.05
COL6A1-203ENST00000466285 GALP22466 123 aa15.37■□□□□ 0.05
COL6A1-203ENST00000466285 FGF9P31371 208 aaPredicted RBP15.37■□□□□ 0.05
COL6A1-203ENST00000466285 FCGR2CP31995 323 aa15.37■□□□□ 0.05
COL6A1-203ENST00000466285 GPR183P32249 361 aa15.37■□□□□ 0.05
COL6A1-203ENST00000466285 RANBP1P43487 201 aa15.37■□□□□ 0.05
COL6A1-203ENST00000466285 OR2B8PP59922 312 aa15.37■□□□□ 0.05
COL6A1-203ENST00000466285 KCTD21Q4G0X4 260 aa15.37■□□□□ 0.05
COL6A1-203ENST00000466285 ZNF57Q68EA5 555 aaPredicted RBP15.37■□□□□ 0.05
COL6A1-203ENST00000466285 EEF1AKMT3Q96AZ1 226 aa15.37■□□□□ 0.05
COL6A1-203ENST00000466285 RPA2P15927 270 aa15.36■□□□□ 0.05
COL6A1-203ENST00000466285 MXD1Q05195 221 aa15.36■□□□□ 0.05
COL6A1-203ENST00000466285 ARL6IP1Q15041 203 aa15.36■□□□□ 0.05
COL6A1-203ENST00000466285 FAM209BQ5JX69 171 aa15.36■□□□□ 0.05
COL6A1-203ENST00000466285 ZNF66Q6ZN08 573 aa15.36■□□□□ 0.05
COL6A1-203ENST00000466285 SPAG16Q8N0X2 631 aa15.36■□□□□ 0.05
COL6A1-203ENST00000466285 OR10W1Q8NGF6 305 aa15.36■□□□□ 0.05
COL6A1-203ENST00000466285 OR52B4Q8NGK2 314 aa15.36■□□□□ 0.05
COL6A1-203ENST00000466285 VSTM2AQ8TAG5 236 aa15.36■□□□□ 0.05
COL6A1-203ENST00000466285 MEIS3P1A6NDR6 274 aa15.35■□□□□ 0.05
COL6A1-203ENST00000466285 S1PR2O95136 353 aa15.35■□□□□ 0.05
COL6A1-203ENST00000466285 SDC2P34741 201 aa15.35■□□□□ 0.05
COL6A1-203ENST00000466285 MAS1LP35410 378 aa15.35■□□□□ 0.05
COL6A1-203ENST00000466285 FXYD4P59646 89 aa15.35■□□□□ 0.05
COL6A1-203ENST00000466285 BEST4Q8NFU0 473 aa15.35■□□□□ 0.05
COL6A1-203ENST00000466285 ZNF502Q8TBZ5 544 aa15.35■□□□□ 0.05
COL6A1-203ENST00000466285 ZNF414Q96IQ9 312 aa15.35■□□□□ 0.05
COL6A1-203ENST00000466285 GGTLC1Q9BX51 225 aa15.35■□□□□ 0.05
COL6A1-203ENST00000466285 BET1LQ9NYM9 111 aa15.35■□□□□ 0.05
COL6A1-203ENST00000466285 DNAH10Q8IVF4 4471 aa15.35■□□□□ 0.05
COL6A1-203ENST00000466285 TRAV18A0A075B6X5 111 aa15.34■□□□□ 0.05
COL6A1-203ENST00000466285 SLC22A5O76082 557 aa15.34■□□□□ 0.05
COL6A1-203ENST00000466285 PPYP01298 95 aa15.34■□□□□ 0.05
COL6A1-203ENST00000466285 CLEC3BP05452 202 aa15.34■□□□□ 0.05
COL6A1-203ENST00000466285 ZNF818PQ6ZRF7 136 aa15.34■□□□□ 0.05
COL6A1-203ENST00000466285 CENPOQ9BU64 300 aa15.34■□□□□ 0.05
COL6A1-203ENST00000466285 HRASLSQ9HDD0 168 aa15.34■□□□□ 0.05
COL6A1-203ENST00000466285 UBQLN2Q9UHD9 624 aa15.34■□□□□ 0.05
COL6A1-203ENST00000466285 MFAP2P55001 183 aa15.33■□□□□ 0.04
COL6A1-203ENST00000466285 ARPC4P59998 168 aa15.33■□□□□ 0.04
COL6A1-203ENST00000466285 PMS2P11Q13670 270 aa15.33■□□□□ 0.04
COL6A1-203ENST00000466285 SLC16A13Q7RTY0 426 aa15.33■□□□□ 0.04
COL6A1-203ENST00000466285 OR51H1Q8NH63 302 aa15.33■□□□□ 0.04
COL6A1-203ENST00000466285 LINC00476Q8WZB0 136 aa15.33■□□□□ 0.04
COL6A1-203ENST00000466285 TMEM140Q9NV12 185 aa15.33■□□□□ 0.04
COL6A1-203ENST00000466285 IGHV3OR16-8A0A075B7F1 116 aa15.32■□□□□ 0.04
COL6A1-203ENST00000466285 IGHV3-21A0A0B4J1V1 117 aa15.32■□□□□ 0.04
COL6A1-203ENST00000466285 UPK2O00526 184 aa15.32■□□□□ 0.04
COL6A1-203ENST00000466285 HRASP01112 189 aa15.32■□□□□ 0.04
COL6A1-203ENST00000466285 C8orf88P0DMB2 117 aa15.32■□□□□ 0.04
COL6A1-203ENST00000466285 TGFBR1P36897 503 aa15.32■□□□□ 0.04
COL6A1-203ENST00000466285 ZNF585BQ52M93 769 aa15.32■□□□□ 0.04
COL6A1-203ENST00000466285 TMEM17Q86X19 198 aa15.32■□□□□ 0.04
COL6A1-203ENST00000466285 HOGA1Q86XE5 327 aa15.32■□□□□ 0.04
COL6A1-203ENST00000466285 IL17DQ8TAD2 202 aa15.32■□□□□ 0.04
COL6A1-203ENST00000466285 SLC5A7Q9GZV3 580 aa15.32■□□□□ 0.04
COL6A1-203ENST00000466285 A0A0J9YWU9 116 aa15.31■□□□□ 0.04
COL6A1-203ENST00000466285 F8W735 103 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-203ENST00000466285 DEFA4P12838 97 aa15.31■□□□□ 0.04
COL6A1-203ENST00000466285 WT1-ASQ06250 92 aa15.31■□□□□ 0.04
COL6A1-203ENST00000466285 POU2AF1Q16633 256 aa15.31■□□□□ 0.04
COL6A1-203ENST00000466285 FAM106AQ4KMX7 169 aa15.31■□□□□ 0.04
COL6A1-203ENST00000466285 LOC102724200A0A096LPH7 203 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-203ENST00000466285 TNFAIP8O95379 198 aa15.3■□□□□ 0.04
COL6A1-203ENST00000466285 ODF3L2Q3SX64 289 aa15.3■□□□□ 0.04
COL6A1-203ENST00000466285 IDNKQ5T6J7 187 aa15.3■□□□□ 0.04
COL6A1-203ENST00000466285 TPRA1Q86W33 373 aa15.3■□□□□ 0.04
COL6A1-203ENST00000466285 TMEM190Q8WZ59 177 aa15.3■□□□□ 0.04
COL6A1-203ENST00000466285 ZNF436Q9C0F3 470 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-203ENST00000466285 AUNIPQ9H7T9 357 aa15.3■□□□□ 0.04
COL6A1-203ENST00000466285 TRBV7-1A0A0A6YYK4 115 aa15.29■□□□□ 0.04
COL6A1-203ENST00000466285 OR2T8A6NH00 312 aa15.29■□□□□ 0.04
COL6A1-203ENST00000466285 RBFOX2O43251 390 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL6A1-203ENST00000466285 SCGNO76038 276 aa15.29■□□□□ 0.04
COL6A1-203ENST00000466285 HIST1H1BP16401 226 aaKnown RBP15.29■□□□□ 0.04
COL6A1-203ENST00000466285 TAS2R31P59538 309 aa15.29■□□□□ 0.04
COL6A1-203ENST00000466285 MSMO1Q15800 293 aa15.29■□□□□ 0.04
COL6A1-203ENST00000466285 DEFB135Q30KP9 77 aa15.29■□□□□ 0.04
COL6A1-203ENST00000466285 OR1L6Q8NGR2 347 aa15.29■□□□□ 0.04
COL6A1-203ENST00000466285 OR4A5Q8NH83 315 aa15.29■□□□□ 0.04
COL6A1-203ENST00000466285 CHRDL1Q9BU40 450 aa15.29■□□□□ 0.04
COL6A1-203ENST00000466285 SSR3Q9UNL2 185 aa15.29■□□□□ 0.04
COL6A1-203ENST00000466285 LOC100506127A0A0U1RQW1 187 aa15.28■□□□□ 0.04
COL6A1-203ENST00000466285 TGOLN2O43493 480 aa15.28■□□□□ 0.04
COL6A1-203ENST00000466285 ZNF207O43670 478 aaKnown RBP15.28■□□□□ 0.04
COL6A1-203ENST00000466285 DHFRP00374 187 aa15.28■□□□□ 0.04
COL6A1-203ENST00000466285 AADACL3Q5VUY0 350 aa15.28■□□□□ 0.04
COL6A1-203ENST00000466285 CXorf58Q96LI9 332 aa15.28■□□□□ 0.04
COL6A1-203ENST00000466285 QTRT1Q9BXR0 403 aaKnown RBP15.28■□□□□ 0.04
COL6A1-203ENST00000466285 NSG2Q9Y328 171 aa15.28■□□□□ 0.04
COL6A1-203ENST00000466285 VPS13DQ5THJ4 4388 aa15.28■□□□□ 0.04
COL6A1-203ENST00000466285 DBX1A6NMT0 343 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms