RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 TCTEX1D2Q8WW35 142 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 CCDC140Q96MF4 163 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 FANCD2OSQ96PS1 177 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 HSD17B10Q99714 261 aaKnown RBP7.26□□□□□ -1.25
USP39-212ENST00000465514 DCSTAMPQ9H295 470 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 NDUFB11Q9NX14 153 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 MLXQ9UH92 298 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 SPATA2Q9UM82 520 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 TMEM213A2RRL7 107 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 CRYGCP07315 174 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 MYOD1P15172 320 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 PSMB6P28072 239 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 MAS1LP35410 378 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 EIF4EBP1Q13541 118 aaPredicted RBP7.25□□□□□ -1.25
USP39-212ENST00000465514 FAM106AQ4KMX7 169 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 SSX9Q7RTT3 188 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 SLC16A13Q7RTY0 426 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 LYG2Q86SG7 212 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 TMEM61Q8N0U2 210 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 MFSD4AQ8N468 514 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 UXS1Q8NBZ7 420 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 OR52B4Q8NGK2 314 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 PHLDA1Q8WV24 401 aaPredicted RBP7.25□□□□□ -1.25
USP39-212ENST00000465514 EEF1AKMT3Q96AZ1 226 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 GPHA2Q96T91 129 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 TAS2R8Q9NYW2 309 aa7.25□□□□□ -1.25
USP39-212ENST00000465514 TMEM235A6NFC5 223 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 A8MWP6 167 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 SSX5O60225 188 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 SCAF4O95104 1147 aaKnown RBP7.24□□□□□ -1.25
USP39-212ENST00000465514 DHFRP00374 187 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 HRASP01112 189 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 REG1AP05451 166 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 CLEC3BP05452 202 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 HIST1H1BP16401 226 aaKnown RBP7.24□□□□□ -1.25
USP39-212ENST00000465514 CTRB1P17538 263 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 GALP22466 123 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 GNG2P59768 71 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 TNFRSF9Q07011 255 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 KLK9Q2XQG4 91 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 TM4SF20Q53R12 229 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 CTRB2Q6GPI1 263 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 ZNF66Q6ZN08 573 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 ZNF575Q86XF7 245 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 CNBD2Q96M20 576 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 GGTLC1Q9BX51 225 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 ANXA10Q9UJ72 324 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 KLK9Q9UKQ9 250 aa7.24□□□□□ -1.25
USP39-212ENST00000465514 LOC102724200A0A096LPH7 203 aaPredicted RBP7.23□□□□□ -1.25
USP39-212ENST00000465514 TRBV7-1A0A0A6YYK4 115 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 MFSD2BA6NFX1 497 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 PRSS29PA6NIE9 313 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 CGB1A6NKQ9 187 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 NOTOA8MTQ0 251 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 TNFSF12O43508 249 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 XRCC3O43542 346 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 DEFA4P12838 97 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 HLA-GP17693 338 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 RPL8P62917 257 aaKnown RBP7.23□□□□□ -1.25
USP39-212ENST00000465514 ANKRD55Q3KP44 614 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 OR4A47Q6IF82 309 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 BTNL8Q6UX41 500 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 UNQ9165/PRO28630Q6UXU0 137 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 MAPKAPK5-AS1Q8N8E1 139 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 SECTM1Q8WVN6 248 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 CCL28Q9NRJ3 127 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 DAPK2Q9UIK4 370 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 BLOC1S6Q9UL45 172 aa7.23□□□□□ -1.25
USP39-212ENST00000465514 IGLV11-55A0A075B6I3 123 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 SCGNO76038 276 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 C8orf88P0DMB2 117 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 PTHLHP12272 177 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 FGF9P31371 208 aaPredicted RBP7.22□□□□□ -1.25
USP39-212ENST00000465514 FCGR2CP31995 323 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 OR2B8PP59922 312 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 TIMM50Q3ZCQ8 353 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 ZNF585BQ52M93 769 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 RBPMS2Q6ZRY4 209 aaKnown RBP7.22□□□□□ -1.25
USP39-212ENST00000465514 SPAG16Q8N0X2 631 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 OR4A5Q8NH83 315 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 CXorf58Q96LI9 332 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 AIFM2Q9BRQ8 373 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 HRASLSQ9HDD0 168 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 TXNL4BQ9NX01 149 aaKnown RBP7.22□□□□□ -1.25
USP39-212ENST00000465514 BET1LQ9NYM9 111 aa7.22□□□□□ -1.25
USP39-212ENST00000465514 RRP15Q9Y3B9 282 aaKnown RBP7.22□□□□□ -1.25
USP39-212ENST00000465514 TRAV3A0A0B4J244 114 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 TRAV25A0A0B4J276 109 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 IGHV3-35A0A0C4DH35 117 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 SULT1C2O00338 296 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 GPR183P32249 361 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 HSPA13P48723 471 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 ARPC4P59998 168 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 MSMO1Q15800 293 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 IZUMO2Q6UXV1 221 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 TPRA1Q86W33 373 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 GVQW1Q8N7I0 195 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 BEST4Q8NFU0 473 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 OR1L6Q8NGR2 347 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 OR13F1Q8NGS4 319 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms