RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 DERL1Q9BUN8 251 aa15.08■□□□□ 0
SYNE4-204ENST00000465425 AURKAIP1Q9NWT8 199 aaPredicted RBP15.08■□□□□ 0
SYNE4-204ENST00000465425 XKRY2A2RUG3 117 aa15.08■□□□□ 0
SYNE4-204ENST00000465425 TIMP3P35625 211 aa15.08■□□□□ 0
SYNE4-204ENST00000465425 GNG10P50151 68 aa15.08■□□□□ 0
SYNE4-204ENST00000465425 OR1P1Q8NH06 330 aa15.08■□□□□ 0
SYNE4-204ENST00000465425 HINT2Q9BX68 163 aa15.08■□□□□ 0
SYNE4-204ENST00000465425 TMEM14BQ9NUH8 114 aa15.08■□□□□ 0
SYNE4-204ENST00000465425 TTC28Q96AY4 2481 aa15.07■□□□□ 0
SYNE4-204ENST00000465425 ZNF729A6NN14 1252 aaPredicted RBP15.07■□□□□ 0
SYNE4-204ENST00000465425 CD99P14209 185 aa15.07■□□□□ 0
SYNE4-204ENST00000465425 STUMQ69YW2 141 aa15.07■□□□□ 0
SYNE4-204ENST00000465425 SFXN3Q9BWM7 321 aa15.07■□□□□ 0
SYNE4-204ENST00000465425 LSM4Q9Y4Z0 139 aaKnown RBP15.07■□□□□ 0
SYNE4-204ENST00000465425 CNOT1A5YKK6 2376 aaKnown RBP15.07■□□□□ 0
SYNE4-204ENST00000465425 IGHV1-46P01743 117 aa15.06■□□□□ 0
SYNE4-204ENST00000465425 IL6RP08887 468 aaPredicted RBP15.06■□□□□ 0
SYNE4-204ENST00000465425 ARSJQ5FYB0 599 aaPredicted RBP15.06■□□□□ 0
SYNE4-204ENST00000465425 C9orf152Q5JTZ5 239 aa15.06■□□□□ 0
SYNE4-204ENST00000465425 CISD2Q8N5K1 135 aaKnown RBP15.06■□□□□ 0
SYNE4-204ENST00000465425 FUT9Q9Y231 359 aa15.06■□□□□ 0
SYNE4-204ENST00000465425 IRF2P14316 349 aa15.06■□□□□ 0
SYNE4-204ENST00000465425 FAM78BQ5VT40 261 aa15.06■□□□□ 0
SYNE4-204ENST00000465425 Q6ZS92 163 aa15.06■□□□□ 0
SYNE4-204ENST00000465425 ACY3Q96HD9 319 aa15.06■□□□□ 0
SYNE4-204ENST00000465425 CCL13Q99616 98 aa15.06■□□□□ 0
SYNE4-204ENST00000465425 IDI2-AS1Q9NZ38 188 aa15.06■□□□□ 0
SYNE4-204ENST00000465425 DMXL1Q9Y485 3027 aa15.06■□□□□ 0
SYNE4-204ENST00000465425 CA2P00918 260 aa15.05■□□□□ 0
SYNE4-204ENST00000465425 RHOBP62745 196 aa15.05■□□□□ 0
SYNE4-204ENST00000465425 LCN2P80188 198 aa15.05■□□□□ 0
SYNE4-204ENST00000465425 FAM27E3Q08E93 113 aa15.05■□□□□ 0
SYNE4-204ENST00000465425 STPG3Q8N7X2 389 aa15.05■□□□□ 0
SYNE4-204ENST00000465425 GAFA1Q96PS6 74 aa15.05■□□□□ 0
SYNE4-204ENST00000465425 TMEM204Q9BSN7 226 aa15.05■□□□□ 0
SYNE4-204ENST00000465425 TP53TG5Q9Y2B4 290 aa15.05■□□□□ 0
SYNE4-204ENST00000465425 OR51B2Q9Y5P1 312 aa15.05■□□□□ 0
SYNE4-204ENST00000465425 CRYABP02511 175 aaKnown RBP15.05■□□□□ -0
SYNE4-204ENST00000465425 TYMSP04818 313 aa15.05■□□□□ -0
SYNE4-204ENST00000465425 EFNB3Q15768 340 aa15.05■□□□□ -0
SYNE4-204ENST00000465425 ACTL10Q5JWF8 245 aa15.05■□□□□ -0
SYNE4-204ENST00000465425 DNLZQ5SXM8 178 aa15.05■□□□□ -0
SYNE4-204ENST00000465425 FAM216BQ8N7L0 139 aa15.05■□□□□ -0
SYNE4-204ENST00000465425 TMEM37Q8WXS4 190 aa15.05■□□□□ -0
SYNE4-204ENST00000465425 BTF3L4Q96K17 158 aa15.05■□□□□ -0
SYNE4-204ENST00000465425 PRDM13Q9H4Q3 707 aa15.05■□□□□ -0
SYNE4-204ENST00000465425 TET2Q6N021 2002 aaPredicted RBP15.04■□□□□ -0
SYNE4-204ENST00000465425 MDFIC2A0A1B0GVS7 189 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 MT-CO2P00403 227 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 SFRP2Q96HF1 295 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 PRNDQ9UKY0 176 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 DSCAMO60469 2012 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 LAMA5O15230 3695 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 PGPEP1LA6NFU8 196 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 C1QTNF9P0C862 333 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 CD40P25942 277 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 GAMTQ14353 236 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 RTL8BQ17RB0 113 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 TCF23Q7RTU1 214 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 ZNF439Q8NDP4 499 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 CORO2AQ92828 525 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 C1orf159Q96HA4 380 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 PLEKHA3Q9HB20 300 aa15.04■□□□□ -0
SYNE4-204ENST00000465425 SEPSECSQ9HD40 501 aaKnown RBP15.04■□□□□ -0
SYNE4-204ENST00000465425 SCO2A0A1W2PP80 73 aa15.03■□□□□ -0
SYNE4-204ENST00000465425 J3QR06 171 aa15.03■□□□□ -0
SYNE4-204ENST00000465425 TM4SF5O14894 197 aa15.03■□□□□ -0
SYNE4-204ENST00000465425 ZNF788Q6ZQV5 615 aa15.03■□□□□ -0
SYNE4-204ENST00000465425 IL3RAP26951 378 aa15.03■□□□□ -0
SYNE4-204ENST00000465425 GCHFRP30047 84 aa15.03■□□□□ -0
SYNE4-204ENST00000465425 RPL29P47914 159 aaKnown RBP15.03■□□□□ -0
SYNE4-204ENST00000465425 NUBP1P53384 320 aa15.03■□□□□ -0
SYNE4-204ENST00000465425 COA6Q5JTJ3 125 aaKnown RBP15.03■□□□□ -0
SYNE4-204ENST00000465425 ZNF114Q8NC26 417 aa15.03■□□□□ -0
SYNE4-204ENST00000465425 ZCCHC14Q8WYQ9 949 aaKnown RBP15.03■□□□□ -0
SYNE4-204ENST00000465425 IMMP2LQ96T52 175 aa15.03■□□□□ -0
SYNE4-204ENST00000465425 ICE1Q9Y2F5 2266 aa15.02■□□□□ -0
SYNE4-204ENST00000465425 A0A0U1RQK1 487 aa15.02■□□□□ -0
SYNE4-204ENST00000465425 ZNF320A2RRD8 509 aa15.02■□□□□ -0
SYNE4-204ENST00000465425 A8MXE2 369 aa15.02■□□□□ -0
SYNE4-204ENST00000465425 AMBPP02760 352 aa15.02■□□□□ -0
SYNE4-204ENST00000465425 MYOD1P15172 320 aa15.02■□□□□ -0
SYNE4-204ENST00000465425 DEFA6Q01524 100 aa15.02■□□□□ -0
SYNE4-204ENST00000465425 POU2AF1Q16633 256 aa15.02■□□□□ -0
SYNE4-204ENST00000465425 TMEM30BQ3MIR4 351 aa15.02■□□□□ -0
SYNE4-204ENST00000465425 SLC35D1Q9NTN3 355 aa15.02■□□□□ -0
SYNE4-204ENST00000465425 NDUFB7P17568 137 aa15.01□□□□□ -0.01
SYNE4-204ENST00000465425 IGFBP2P18065 325 aa15.01□□□□□ -0.01
SYNE4-204ENST00000465425 SLC25A48Q6ZT89 311 aaKnown RBP15.01□□□□□ -0.01
SYNE4-204ENST00000465425 C22orf34Q6ZV56 151 aa15.01□□□□□ -0.01
SYNE4-204ENST00000465425 RPUSD1Q9UJJ7 312 aaKnown RBP15.01□□□□□ -0.01
SYNE4-204ENST00000465425 YTHDF2Q9Y5A9 579 aaKnown RBP15.01□□□□□ -0.01
SYNE4-204ENST00000465425 TRBV20OR9-2A0A075B6H5 130 aa15.01□□□□□ -0.01
SYNE4-204ENST00000465425 hADV38S2A0JD32 116 aa15.01□□□□□ -0.01
SYNE4-204ENST00000465425 DVL1O14640 695 aa15.01□□□□□ -0.01
SYNE4-204ENST00000465425 MMP23AO75900 390 aa15.01□□□□□ -0.01
SYNE4-204ENST00000465425 CEACAM8P31997 349 aaPredicted RBP15.01□□□□□ -0.01
SYNE4-204ENST00000465425 SPATA31B1PQ5VZV4 182 aa15.01□□□□□ -0.01
SYNE4-204ENST00000465425 RP1L1Q8IWN7 2480 aaPredicted RBP15.01□□□□□ -0.01
SYNE4-204ENST00000465425 OR4P4Q8NGL7 312 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms