RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 CACNG8Q8WXS5 425 aa7.03□□□□□ -1.28
ACTB-208ENST00000464611 TMEM190Q8WZ59 177 aa7.03□□□□□ -1.28
ACTB-208ENST00000464611 HIST1H2BHQ93079 126 aa7.03□□□□□ -1.28
ACTB-208ENST00000464611 RPUSD4Q96CM3 377 aaKnown RBP7.03□□□□□ -1.28
ACTB-208ENST00000464611 SLC35E1Q96K37 410 aa7.03□□□□□ -1.28
ACTB-208ENST00000464611 UHRF2Q96PU4 802 aa7.03□□□□□ -1.28
ACTB-208ENST00000464611 HIST1H2BNQ99877 126 aa7.03□□□□□ -1.28
ACTB-208ENST00000464611 HIST1H2BMQ99879 126 aa7.03□□□□□ -1.28
ACTB-208ENST00000464611 QTRT1Q9BXR0 403 aaKnown RBP7.03□□□□□ -1.28
ACTB-208ENST00000464611 PARLQ9H300 379 aa7.03□□□□□ -1.28
ACTB-208ENST00000464611 TMEM140Q9NV12 185 aa7.03□□□□□ -1.28
ACTB-208ENST00000464611 SLC25A10Q9UBX3 287 aaPredicted RBP7.03□□□□□ -1.28
ACTB-208ENST00000464611 TCF19Q9Y242 345 aa7.03□□□□□ -1.28
ACTB-208ENST00000464611 LINC00312Q9Y6C7 94 aa7.03□□□□□ -1.28
ACTB-208ENST00000464611 USP24Q9UPU5 2620 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 TGIF2-C20orf24A0A0A6YYL0 155 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 IGHV3-43A0A0B4J1X8 118 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 A0A1W2PPE3 182 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 PRSS46E5RG02 174 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 PRRG2O14669 202 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 PAGE4O60829 102 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 GGCTO75223 188 aaKnown RBP7.02□□□□□ -1.29
ACTB-208ENST00000464611 PROP1O75360 226 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 IGKV1D-33P01593 117 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 IGKV1-33P01594 117 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 GYPAP02724 150 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 TRGC2P03986 189 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 IGHV3-43DP0DP04 118 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 NPY1RP25929 384 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 RBPJQ06330 500 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 C17orf58Q2M2W7 97 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 SSX7Q7RTT5 188 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 VSTM2AQ8TAG5 236 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 RNASEH2CQ8TDP1 164 aaKnown RBP7.02□□□□□ -1.29
ACTB-208ENST00000464611 ITLN1Q8WWA0 313 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 RHOVQ96L33 236 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 SLC25A22Q9H936 323 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 GCM1Q9NP62 436 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 GSN-AS1Q9NRJ2 163 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 TMEM167BQ9NRX6 74 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 BET1LQ9NYM9 111 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 RPUSD1Q9UJJ7 312 aaKnown RBP7.02□□□□□ -1.29
ACTB-208ENST00000464611 SLC45A2Q9UMX9 530 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 LSM4Q9Y4Z0 139 aaKnown RBP7.02□□□□□ -1.29
ACTB-208ENST00000464611 URGCP-MRPS24S4R325 110 aa7.02□□□□□ -1.29
ACTB-208ENST00000464611 KIAA2026Q5HYC2 2103 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 TPRP12270 2363 aaKnown RBP7.01□□□□□ -1.29
ACTB-208ENST00000464611 DEFB108AA8MXU0 73 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 C9JCJ5 164 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 C16orf97H3BN30 126 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 UPK2O00526 184 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 DVL1O14640 695 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 SPRY3O43610 288 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 APOA2P02652 100 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 TRGC1P0CF51 173 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 EGR1P18146 543 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 CD40P25942 277 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 GPX4P36969 197 aaPredicted RBP7.01□□□□□ -1.29
ACTB-208ENST00000464611 SUB1P53999 127 aaKnown RBP eCLIP7.01□□□□□ -1.299e-20■■□□□ 13.2
ACTB-208ENST00000464611 TAS2R45P59539 299 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 TFF3Q07654 80 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 C2orf83Q53S99 150 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 CT45A1Q5HYN5 189 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 ZNF343Q6P1L6 599 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 SLC25A48Q6ZT89 311 aaKnown RBP7.01□□□□□ -1.29
ACTB-208ENST00000464611 C16orf82Q7Z2V1 217 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 TMEM144Q7Z5S9 345 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 TMEM183AQ8IXX5 376 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 LINC00311Q8N616 119 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 ZNF439Q8NDP4 499 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 SLC24A4Q8NFF2 622 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 OR1L8Q8NGR8 309 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 CT45A3Q8NHU0 189 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 SNRNP40Q96DI7 357 aaKnown RBP7.01□□□□□ -1.29
ACTB-208ENST00000464611 PFDN5Q99471 154 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 FZR1Q9UM11 496 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 FAM215AQ9Y5M1 114 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 PXMP4Q9Y6I8 212 aa7.01□□□□□ -1.29
ACTB-208ENST00000464611 IGHV3-64DA0A0J9YX35 117 aa7□□□□□ -1.29
ACTB-208ENST00000464611 A0A1W2PN81 502 aa7□□□□□ -1.29
ACTB-208ENST00000464611 J3QR06 171 aa7□□□□□ -1.29
ACTB-208ENST00000464611 GATCO43716 136 aaKnown RBP7□□□□□ -1.29
ACTB-208ENST00000464611 FSTL3O95633 263 aa7□□□□□ -1.29
ACTB-208ENST00000464611 GCGP01275 180 aa7□□□□□ -1.29
ACTB-208ENST00000464611 IGHV1-46P01743 117 aa7□□□□□ -1.29
ACTB-208ENST00000464611 CCKARP32238 428 aa7□□□□□ -1.29
ACTB-208ENST00000464611 MC5RP33032 325 aa7□□□□□ -1.29
ACTB-208ENST00000464611 CHRNA7P36544 502 aa7□□□□□ -1.29
ACTB-208ENST00000464611 PDLIM4P50479 330 aa7□□□□□ -1.29
ACTB-208ENST00000464611 TDGF1P3P51864 188 aa7□□□□□ -1.29
ACTB-208ENST00000464611 ZNF134P52741 427 aa7□□□□□ -1.29
ACTB-208ENST00000464611 ERHP84090 104 aaKnown RBP7□□□□□ -1.29
ACTB-208ENST00000464611 PRCDQ00LT1 54 aa7□□□□□ -1.29
ACTB-208ENST00000464611 TLE1Q04724 770 aa7□□□□□ -1.29
ACTB-208ENST00000464611 OR4A47Q6IF82 309 aa7□□□□□ -1.29
ACTB-208ENST00000464611 SPNS3Q6ZMD2 512 aa7□□□□□ -1.29
ACTB-208ENST00000464611 PQLC2Q6ZP29 291 aa7□□□□□ -1.29
ACTB-208ENST00000464611 LRP11Q86VZ4 500 aa7□□□□□ -1.29
ACTB-208ENST00000464611 LURAP1LQ8IV03 231 aa7□□□□□ -1.29
ACTB-208ENST00000464611 HIST3H2BBQ8N257 126 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms