RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 RELNP78509 3460 aa16.68■□□□□ 0.26
TUBGCP3-204ENST00000464139 SRRM4A7MD48 611 aaKnown RBP16.68■□□□□ 0.26
TUBGCP3-204ENST00000464139 HRASP01112 189 aa16.68■□□□□ 0.26
TUBGCP3-204ENST00000464139 OR13D1Q8NGV5 346 aa16.68■□□□□ 0.26
TUBGCP3-204ENST00000464139 C1orf159Q96HA4 380 aa16.68■□□□□ 0.26
TUBGCP3-204ENST00000464139 GGACTQ9BVM4 153 aa16.68■□□□□ 0.26
TUBGCP3-204ENST00000464139 SLC35D1Q9NTN3 355 aa16.68■□□□□ 0.26
TUBGCP3-204ENST00000464139 NAT8Q9UHE5 227 aa16.68■□□□□ 0.26
TUBGCP3-204ENST00000464139 PPIAL4EA0A075B759 164 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 PPIAL4DF5H284 164 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 TMEM178BH3BS89 294 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 CA2P00918 260 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 PPIAL4FP0DN26 164 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 MEOX2P50222 304 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 TMEM241Q24JQ0 296 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 LYPD2Q6UXB3 125 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 SLC24A4Q8NFF2 622 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 SSMEM1Q8WWF3 244 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 GGTLC1Q9BX51 225 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 PARLQ9H300 379 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 PPIAL4AQ9Y536 164 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 OR51B2Q9Y5P1 312 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 IGF2RP11717 2491 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 SEC14L6B5MCN3 397 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 CLDN34H7C241 214 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 MPDU1O75352 247 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 KBTBD11O94819 623 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 NPY1RP25929 384 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 TMPRSS3P57727 454 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 H1FXQ92522 213 aaKnown RBP16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 ENY2Q9NPA8 101 aa16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 METTL1Q9UBP6 276 aaKnown RBP16.67■□□□□ 0.26
TUBGCP3-204ENST00000464139 A0A1W2PPV4 95 aa16.66■□□□□ 0.26
TUBGCP3-204ENST00000464139 TMEM250H0YL14 139 aa16.66■□□□□ 0.26
TUBGCP3-204ENST00000464139 AP4M1O00189 453 aa16.66■□□□□ 0.26
TUBGCP3-204ENST00000464139 OPRK1P41145 380 aa16.66■□□□□ 0.26
TUBGCP3-204ENST00000464139 UBE2G2P60604 165 aa16.66■□□□□ 0.26
TUBGCP3-204ENST00000464139 KIAA0141Q14154 515 aaPredicted RBP16.66■□□□□ 0.26
TUBGCP3-204ENST00000464139 ARSJQ5FYB0 599 aaPredicted RBP16.66■□□□□ 0.26
TUBGCP3-204ENST00000464139 TMEM200BQ69YZ2 307 aa16.66■□□□□ 0.26
TUBGCP3-204ENST00000464139 CYP2G1PQ6ZSU1 146 aa16.66■□□□□ 0.26
TUBGCP3-204ENST00000464139 GAL3ST2Q9H3Q3 398 aa16.66■□□□□ 0.26
TUBGCP3-204ENST00000464139 PXMP4Q9Y6I8 212 aa16.66■□□□□ 0.26
TUBGCP3-204ENST00000464139 TMEM106BQ9NUM4 274 aa16.65■□□□□ 0.26
TUBGCP3-204ENST00000464139 POU2AF1Q16633 256 aa16.65■□□□□ 0.26
TUBGCP3-204ENST00000464139 RNASE6Q93091 150 aaKnown RBP16.65■□□□□ 0.26
TUBGCP3-204ENST00000464139 ZNF714Q96N38 554 aa16.65■□□□□ 0.26
TUBGCP3-204ENST00000464139 TMEM242Q9NWH2 141 aa16.65■□□□□ 0.26
TUBGCP3-204ENST00000464139 C11orf94C9JXX5 98 aa16.64■□□□□ 0.26
TUBGCP3-204ENST00000464139 E7EQL1 145 aa16.64■□□□□ 0.26
TUBGCP3-204ENST00000464139 COL8A2P25067 703 aa16.64■□□□□ 0.26
TUBGCP3-204ENST00000464139 RTL8BQ17RB0 113 aa16.64■□□□□ 0.26
TUBGCP3-204ENST00000464139 C1orf87Q8N0U7 546 aa16.64■□□□□ 0.26
TUBGCP3-204ENST00000464139 MRPL20Q9BYC9 149 aaKnown RBP16.64■□□□□ 0.26
TUBGCP3-204ENST00000464139 NPVFQ9HCQ7 196 aa16.64■□□□□ 0.26
TUBGCP3-204ENST00000464139 SHISA9B4DS77 424 aa16.64■□□□□ 0.25
TUBGCP3-204ENST00000464139 J3QR06 171 aa16.64■□□□□ 0.25
TUBGCP3-204ENST00000464139 REG1BP48304 166 aa16.64■□□□□ 0.25
TUBGCP3-204ENST00000464139 RND2P52198 227 aa16.64■□□□□ 0.25
TUBGCP3-204ENST00000464139 RPL23P62829 140 aaKnown RBP16.64■□□□□ 0.25
TUBGCP3-204ENST00000464139 MEF2CQ06413 473 aaPredicted RBP16.64■□□□□ 0.25
TUBGCP3-204ENST00000464139 TMEM30BQ3MIR4 351 aa16.64■□□□□ 0.25
TUBGCP3-204ENST00000464139 NCMAPQ5T1S8 102 aa16.64■□□□□ 0.25
TUBGCP3-204ENST00000464139 LSM4Q9Y4Z0 139 aaKnown RBP16.64■□□□□ 0.25
TUBGCP3-204ENST00000464139 UPK2O00526 184 aa16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 NPPCP23582 126 aa16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 NEIL1Q96FI4 390 aaPredicted RBP16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 FAM210BQ96KR6 192 aa16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 DYNLRB1Q9NP97 96 aa16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 TRGC2P03986 189 aa16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 IL6RP08887 468 aaPredicted RBP16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 BSXQ3C1V8 233 aa16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 DMRTC2Q8IXT2 367 aaPredicted RBP16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 OR51G1Q8NGK1 321 aa16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 PRNDQ9UKY0 176 aa16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 ARFGEF3Q5TH69 2177 aa16.63■□□□□ 0.25
TUBGCP3-204ENST00000464139 VSTM5A8MXK1 200 aa16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 ATP5G3P48201 142 aa16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 CST9LP1Q5W188 147 aa16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 ZNF833PQ6ZTB9 187 aa16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 C16orf82Q7Z2V1 217 aa16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 FAM122AQ96E09 287 aa16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 CTSZQ9UBR2 303 aa16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 SAA1P0DJI8 122 aaPredicted RBP16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 ARL14EPLP0DKL9 152 aa16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 ABHD5Q8WTS1 349 aa16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 RAB1CQ92928 201 aa16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 PLEKHA3Q9HB20 300 aa16.62■□□□□ 0.25
TUBGCP3-204ENST00000464139 NDUFB3O43676 98 aa16.61■□□□□ 0.25
TUBGCP3-204ENST00000464139 B2MP61769 119 aa16.61■□□□□ 0.25
TUBGCP3-204ENST00000464139 RBPJQ06330 500 aa16.61■□□□□ 0.25
TUBGCP3-204ENST00000464139 TEPPQ6URK8 271 aa16.61■□□□□ 0.25
TUBGCP3-204ENST00000464139 SLC16A13Q7RTY0 426 aa16.61■□□□□ 0.25
TUBGCP3-204ENST00000464139 NECAP1Q8NC96 275 aa16.61■□□□□ 0.25
TUBGCP3-204ENST00000464139 TEX50A0A1B0GTY4 177 aa16.61■□□□□ 0.25
TUBGCP3-204ENST00000464139 TNFRSF13BO14836 293 aaPredicted RBP16.61■□□□□ 0.25
TUBGCP3-204ENST00000464139 NDUFA6P56556 154 aa16.61■□□□□ 0.25
TUBGCP3-204ENST00000464139 PRCDQ00LT1 54 aa16.61■□□□□ 0.25
TUBGCP3-204ENST00000464139 DIAPH2-AS1Q14236 149 aa16.61■□□□□ 0.25
TUBGCP3-204ENST00000464139 CTDSP1Q9GZU7 261 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms