RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 AIFM2Q9BRQ8 373 aa9.93□□□□□ -0.82
XRN1-203ENST00000463916 LSM4Q9Y4Z0 139 aaKnown RBP9.93□□□□□ -0.82
XRN1-203ENST00000463916 MARCH11A6NNE9 402 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 NPIPB5A8MRT5 1133 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 KRASP01116 189 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 CRYGCP07315 174 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 C15orf32Q32M92 178 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 ISOC1Q96CN7 298 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 ZMAT5Q9UDW3 170 aaKnown RBP9.92□□□□□ -0.82
XRN1-203ENST00000463916 ZNF256Q9Y2P7 627 aaPredicted RBP9.92□□□□□ -0.82
XRN1-203ENST00000463916 ZNF257Q9Y2Q1 563 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 SORL1Q92673 2214 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 FAM223BA6NKX1 122 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 TPPPO94811 219 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 CTRB1P17538 263 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 PI3P19957 117 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 ZP3P21754 424 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 PSMB6P28072 239 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 G6PCP35575 357 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 UCP3P55916 312 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 SYNJ2BPP57105 145 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 ATP5G2Q06055 141 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 CTRB2Q6GPI1 263 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 IL34Q6ZMJ4 242 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 TBC1D26Q86UD7 250 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 LHFPL1Q86WI0 220 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 FAM223AQ8IWN6 122 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 NECAP1Q8NC96 275 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 OR10W1Q8NGF6 305 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 BCL7BQ9BQE9 202 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 SLIRPQ9GZT3 109 aaKnown RBP9.92□□□□□ -0.82
XRN1-203ENST00000463916 COMMD9Q9P000 198 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 CCDC59Q9P031 241 aaKnown RBP9.92□□□□□ -0.82
XRN1-203ENST00000463916 NSG2Q9Y328 171 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 DMRT1Q9Y5R6 373 aa9.92□□□□□ -0.82
XRN1-203ENST00000463916 IGLC7A0M8Q6 106 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 BMPR1BO00238 502 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 NDUFB8O95169 186 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 EXOSC2Q13868 293 aaKnown RBP9.91□□□□□ -0.82
XRN1-203ENST00000463916 RNASE10Q5GAN6 216 aaKnown RBP9.91□□□□□ -0.82
XRN1-203ENST00000463916 SLC25A42Q86VD7 318 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 FBXL7Q9UJT9 491 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 CEPT1Q9Y6K0 416 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 S4R3C0 116 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 TEX50A0A1B0GTY4 177 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 DPPA5A6NC42 116 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 DBX1A6NMT0 343 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 GABARAPH6UMI1 98 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 IGKV1-39P01597 117 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 IGKV1D-39P04432 117 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 SPNP16150 400 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 LPCAT3Q6P1A2 487 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 SLC38A6Q8IZM9 456 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 MRGPRFQ96AM1 343 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 COMMD5Q9GZQ3 224 aa9.91□□□□□ -0.82
XRN1-203ENST00000463916 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.9□□□□□ -0.82
XRN1-203ENST00000463916 PPP5D1E7EU14 171 aa9.9□□□□□ -0.82
XRN1-203ENST00000463916 IGHV3-23P01764 117 aa9.9□□□□□ -0.82
XRN1-203ENST00000463916 CD74P04233 296 aa9.9□□□□□ -0.82
XRN1-203ENST00000463916 IFNA6P05013 189 aa9.9□□□□□ -0.82
XRN1-203ENST00000463916 KLK9Q2XQG4 91 aa9.9□□□□□ -0.82
XRN1-203ENST00000463916 FAAP20Q6NZ36 180 aa9.9□□□□□ -0.82
XRN1-203ENST00000463916 TMEM229BQ8NBD8 167 aa9.9□□□□□ -0.82
XRN1-203ENST00000463916 OR9G4Q8NGQ1 327 aa9.9□□□□□ -0.82
XRN1-203ENST00000463916 DIRAS2Q96HU8 199 aa9.9□□□□□ -0.82
XRN1-203ENST00000463916 OR4C12Q96R67 309 aa9.9□□□□□ -0.82
XRN1-203ENST00000463916 KLK9Q9UKQ9 250 aa9.9□□□□□ -0.82
XRN1-203ENST00000463916 IGLV11-55A0A075B6I3 123 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 LY86O95711 162 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 HLA-AP01891 365 aaKnown RBP9.89□□□□□ -0.83
XRN1-203ENST00000463916 ERVK-16P61578 105 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 WT1-ASQ06250 92 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 ARRDC1Q8N5I2 433 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 C15orf40Q8WUR7 153 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 QTRT1Q9BXR0 403 aaKnown RBP9.89□□□□□ -0.83
XRN1-203ENST00000463916 C6orf62Q9GZU0 229 aaPredicted RBP9.89□□□□□ -0.83
XRN1-203ENST00000463916 IGLV1-51P01701 117 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 FGF2P09038 288 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 TBPP20226 339 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 RPEL1Q2QD12 228 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 C11orf87Q6NUJ2 197 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 STEAP1BQ6NZ63 245 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 SMIM4Q8WVI0 70 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 SEC22AQ96IW7 307 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 CCDC140Q96MF4 163 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 B9D2Q9BPU9 175 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 NDUFA4L2Q9NRX3 87 aa9.89□□□□□ -0.83
XRN1-203ENST00000463916 RAB3DO95716 219 aa9.88□□□□□ -0.83
XRN1-203ENST00000463916 CSN3P07498 182 aa9.88□□□□□ -0.83
XRN1-203ENST00000463916 DEFA4P12838 97 aa9.88□□□□□ -0.83
XRN1-203ENST00000463916 PGAM2P15259 253 aa9.88□□□□□ -0.83
XRN1-203ENST00000463916 TNFSF8P32971 234 aa9.88□□□□□ -0.83
XRN1-203ENST00000463916 PPP5CP53041 499 aa9.88□□□□□ -0.83
XRN1-203ENST00000463916 TAS2R19P59542 299 aa9.88□□□□□ -0.83
XRN1-203ENST00000463916 IL18Q14116 193 aa9.88□□□□□ -0.83
XRN1-203ENST00000463916 CADM3Q8N126 398 aa9.88□□□□□ -0.83
XRN1-203ENST00000463916 TERB2Q8NHR7 220 aa9.88□□□□□ -0.83
XRN1-203ENST00000463916 ELOVL1Q9BW60 279 aa9.88□□□□□ -0.83
XRN1-203ENST00000463916 NXF2Q9GZY0 626 aaKnown RBP9.88□□□□□ -0.83
XRN1-203ENST00000463916 MFSD2BA6NFX1 497 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms