RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 PTBP1P26599 531 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMC1A-204ENST00000463684 ADMP35318 185 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 MFAP2P55001 183 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 RPL8P62917 257 aaKnown RBP10.63□□□□□ -0.71
SMC1A-204ENST00000463684 OR4A5Q8NH83 315 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 TCTEX1D2Q8WW35 142 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 TMEM190Q8WZ59 177 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 TMEM203Q969S6 136 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 PLCXD1Q9NUJ7 323 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 RBMX2Q9Y388 322 aaKnown RBP10.63□□□□□ -0.71
SMC1A-204ENST00000463684 TMEM272A0A1B0GTI8 110 aa10.62□□□□□ -0.71
SMC1A-204ENST00000463684 CYB5BO43169 146 aa10.62□□□□□ -0.71
SMC1A-204ENST00000463684 ARL6IP5O75915 188 aa10.62□□□□□ -0.71
SMC1A-204ENST00000463684 HLA-GP17693 338 aa10.62□□□□□ -0.71
SMC1A-204ENST00000463684 SPHARQ15513 63 aa10.62□□□□□ -0.71
SMC1A-204ENST00000463684 SSX9Q7RTT3 188 aa10.62□□□□□ -0.71
SMC1A-204ENST00000463684 C8orf59Q8N0T1 100 aaPredicted RBP10.62□□□□□ -0.71
SMC1A-204ENST00000463684 OR10R2Q8NGX6 335 aa10.62□□□□□ -0.71
SMC1A-204ENST00000463684 HSD17B10Q99714 261 aaKnown RBP10.62□□□□□ -0.71
SMC1A-204ENST00000463684 C20orf24Q9BUV8 137 aa10.62□□□□□ -0.71
SMC1A-204ENST00000463684 SPATA2Q9UM82 520 aa10.62□□□□□ -0.71
SMC1A-204ENST00000463684 OR2W1Q9Y3N9 320 aa10.62□□□□□ -0.71
SMC1A-204ENST00000463684 A0A1B0GVY2 172 aa10.61□□□□□ -0.71
SMC1A-204ENST00000463684 OR2T8A6NH00 312 aa10.61□□□□□ -0.71
SMC1A-204ENST00000463684 DEFB4AO15263 64 aa10.61□□□□□ -0.71
SMC1A-204ENST00000463684 HLA-DQB1P01920 261 aa10.61□□□□□ -0.71
SMC1A-204ENST00000463684 CTSDP07339 412 aaPredicted RBP10.61□□□□□ -0.71
SMC1A-204ENST00000463684 CTXN2P0C2S0 81 aa10.61□□□□□ -0.71
SMC1A-204ENST00000463684 PLA2G7Q13093 441 aa10.61□□□□□ -0.71
SMC1A-204ENST00000463684 Q6ZS49 121 aa10.61□□□□□ -0.71
SMC1A-204ENST00000463684 NR2C2APQ86WQ0 139 aa10.61□□□□□ -0.71
SMC1A-204ENST00000463684 VN1R17PQ8TDU5 208 aa10.61□□□□□ -0.71
SMC1A-204ENST00000463684 AIFM2Q9BRQ8 373 aa10.61□□□□□ -0.71
SMC1A-204ENST00000463684 V9GY05 133 aa10.61□□□□□ -0.71
SMC1A-204ENST00000463684 K7EMT4 169 aa10.6□□□□□ -0.71
SMC1A-204ENST00000463684 NDUFA4O00483 81 aa10.6□□□□□ -0.71
SMC1A-204ENST00000463684 MFNGO00587 321 aa10.6□□□□□ -0.71
SMC1A-204ENST00000463684 HIST1H1DP16402 221 aaKnown RBP10.6□□□□□ -0.71
SMC1A-204ENST00000463684 NFYAP23511 347 aaPredicted RBP10.6□□□□□ -0.71
SMC1A-204ENST00000463684 LIPKQ5VXJ0 399 aa10.6□□□□□ -0.71
SMC1A-204ENST00000463684 LAIR2Q6ISS4 152 aa10.6□□□□□ -0.71
SMC1A-204ENST00000463684 CENPSQ8N2Z9 138 aa10.6□□□□□ -0.71
SMC1A-204ENST00000463684 MFSD4AQ8N468 514 aa10.6□□□□□ -0.71
SMC1A-204ENST00000463684 UFD1Q92890 307 aa10.6□□□□□ -0.71
SMC1A-204ENST00000463684 BSCL2Q96G97 398 aaPredicted RBP10.6□□□□□ -0.71
SMC1A-204ENST00000463684 HRASLSQ9HDD0 168 aa10.6□□□□□ -0.71
SMC1A-204ENST00000463684 IGKV1D-8A0A087WSZ0 117 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 PRSS29PA6NIE9 313 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 CGB1A6NKQ9 187 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 MRPS14O60783 128 aaKnown RBP10.59□□□□□ -0.71
SMC1A-204ENST00000463684 IGLV2-14P01704 120 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 IRF3Q14653 427 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 TMEM187Q14656 261 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 TRAM1Q15629 374 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 ZNF124Q15973 351 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 HES5Q5TA89 166 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 SPSB3Q6PJ21 355 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 TMEM91Q6ZNR0 172 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 FKBP14Q9NWM8 211 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 BET1LQ9NYM9 111 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 TAS2R8Q9NYW2 309 aa10.59□□□□□ -0.71
SMC1A-204ENST00000463684 METTL21EPA6NDL7 271 aa10.58□□□□□ -0.72
SMC1A-204ENST00000463684 PTGES3LE9PB15 166 aa10.58□□□□□ -0.72
SMC1A-204ENST00000463684 ZNF207O43670 478 aaKnown RBP10.58□□□□□ -0.72
SMC1A-204ENST00000463684 CA1P00915 261 aaPredicted RBP10.58□□□□□ -0.72
SMC1A-204ENST00000463684 GNAO1P09471 354 aa10.58□□□□□ -0.72
SMC1A-204ENST00000463684 DTYMKP23919 212 aa10.58□□□□□ -0.72
SMC1A-204ENST00000463684 CALRP27797 417 aaKnown RBP10.58□□□□□ -0.72
SMC1A-204ENST00000463684 TFPI2P48307 235 aa10.58□□□□□ -0.72
SMC1A-204ENST00000463684 BRWD1-AS2P59051 145 aa10.58□□□□□ -0.72
SMC1A-204ENST00000463684 OR2B8PP59922 312 aa10.58□□□□□ -0.72
SMC1A-204ENST00000463684 SLC25A24Q6NUK1 477 aa10.58□□□□□ -0.72
SMC1A-204ENST00000463684 ZNF66Q6ZN08 573 aa10.58□□□□□ -0.72
SMC1A-204ENST00000463684 SRSF8Q9BRL6 282 aaKnown RBP10.58□□□□□ -0.72
SMC1A-204ENST00000463684 COMMD5Q9GZQ3 224 aa10.58□□□□□ -0.72
SMC1A-204ENST00000463684 C8orf4Q9NR00 106 aa10.58□□□□□ -0.72
SMC1A-204ENST00000463684 LSM2Q9Y333 95 aaKnown RBP10.58□□□□□ -0.72
SMC1A-204ENST00000463684 IGHV3OR16-8A0A075B7F1 116 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 IGKV1D-13A0A0B4J2D9 117 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 IGLC7A0M8Q6 106 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 C15orf62A8K5M9 175 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 IGKV1-13P0DP09 117 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 PSMA1P25786 263 aaKnown RBP10.57□□□□□ -0.72
SMC1A-204ENST00000463684 ARL6IP1Q15041 203 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 TIMM50Q3ZCQ8 353 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 PACRGLQ8N7B6 248 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 CMTM3Q96MX0 182 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 RNF2Q99496 336 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 HRH4Q9H3N8 390 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 SMPXQ9UHP9 88 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 ETV7Q9Y603 341 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 DNAH6Q9C0G6 4158 aa10.57□□□□□ -0.72
SMC1A-204ENST00000463684 IGKV3-7A0A075B6H7 116 aa10.56□□□□□ -0.72
SMC1A-204ENST00000463684 HSMCR30P0CW71 290 aa10.56□□□□□ -0.72
SMC1A-204ENST00000463684 RAB6AP20340 208 aa10.56□□□□□ -0.72
SMC1A-204ENST00000463684 RPS25P62851 125 aaKnown RBP10.56□□□□□ -0.72
SMC1A-204ENST00000463684 PAFAH1B2P68402 229 aa10.56□□□□□ -0.72
SMC1A-204ENST00000463684 EIF4EBP1Q13541 118 aaPredicted RBP10.56□□□□□ -0.72
SMC1A-204ENST00000463684 UBAC2Q8NBM4 344 aa10.56□□□□□ -0.72
SMC1A-204ENST00000463684 ATP6V0BQ99437 205 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms