RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 SYNJ2BPP57105 145 aa10.05□□□□□ -0.8
HDAC1-203ENST00000463172 BRWD1-AS2P59051 145 aa10.05□□□□□ -0.8
HDAC1-203ENST00000463172 CTF1Q16619 201 aa10.05□□□□□ -0.8
HDAC1-203ENST00000463172 C15orf32Q32M92 178 aa10.05□□□□□ -0.8
HDAC1-203ENST00000463172 SLC38A6Q8IZM9 456 aa10.05□□□□□ -0.8
HDAC1-203ENST00000463172 EEF1AKMT3Q96AZ1 226 aa10.05□□□□□ -0.8
HDAC1-203ENST00000463172 DGCR14Q96DF8 476 aaKnown RBP10.05□□□□□ -0.8
HDAC1-203ENST00000463172 TMEM140Q9NV12 185 aa10.05□□□□□ -0.8
HDAC1-203ENST00000463172 FBXL7Q9UJT9 491 aa10.05□□□□□ -0.8
HDAC1-203ENST00000463172 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.04□□□□□ -0.8
HDAC1-203ENST00000463172 MARCH11A6NNE9 402 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 UPK2O00526 184 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 S1PR2O95136 353 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 PRH1P02810 166 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 CRYGCP07315 174 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 IL6RP08887 468 aaPredicted RBP10.04□□□□□ -0.8
HDAC1-203ENST00000463172 TBPP20226 339 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 DEFA5Q01523 94 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 LYSMD2Q8IV50 215 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 CXorf58Q96LI9 332 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 TSC22D3Q99576 134 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 FAM212BQ9NTI7 297 aaPredicted RBP10.04□□□□□ -0.8
HDAC1-203ENST00000463172 FKBP11Q9NYL4 201 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 SIGLEC8Q9NYZ4 499 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 EXTL2Q9UBQ6 330 aa10.04□□□□□ -0.8
HDAC1-203ENST00000463172 RGS5O15539 181 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 GGCTO75223 188 aaKnown RBP10.03□□□□□ -0.8
HDAC1-203ENST00000463172 IGLV1-51P01701 117 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 LPAR6P43657 344 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 OR2B8PP59922 312 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 MRPS10P82664 201 aaKnown RBP10.03□□□□□ -0.8
HDAC1-203ENST00000463172 ZNF45Q02386 682 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 RNASE10Q5GAN6 216 aaKnown RBP10.03□□□□□ -0.8
HDAC1-203ENST00000463172 LCN12Q6JVE5 192 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 SGPP2Q8IWX5 399 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 CADM3Q8N126 398 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 OR1L8Q8NGR8 309 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 RAB2BQ8WUD1 216 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 FCAMRQ8WWV6 532 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 BCL7BQ9BQE9 202 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 QTRT1Q9BXR0 403 aaKnown RBP10.03□□□□□ -0.8
HDAC1-203ENST00000463172 NAA50Q9GZZ1 169 aaKnown RBP10.03□□□□□ -0.8
HDAC1-203ENST00000463172 FXYD6Q9H0Q3 95 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 RABL2AQ9UBK7 228 aaPredicted RBP10.03□□□□□ -0.8
HDAC1-203ENST00000463172 RABL2BQ9UNT1 228 aa10.03□□□□□ -0.8
HDAC1-203ENST00000463172 TRBV7-1A0A0A6YYK4 115 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 ATG12O94817 140 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 TRAPPC2P0DI81 140 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 TRAPPC2BP0DI82 140 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 AREGP15514 252 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 CTRB1P17538 263 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 ALDH3B2P48448 385 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 UCP3P55916 312 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 FAM106AQ4KMX7 169 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 PHLDA2Q53GA4 152 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 CTRB2Q6GPI1 263 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 GTSCR1Q86UQ5 136 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 Q8N402 240 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 ARRDC1Q8N5I2 433 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 OR2K2Q8NGT1 345 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 DYNLRB2Q8TF09 96 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 ZNF486Q96H40 463 aaPredicted RBP10.02□□□□□ -0.81
HDAC1-203ENST00000463172 PRNDQ9UKY0 176 aa10.02□□□□□ -0.81
HDAC1-203ENST00000463172 BMPR1BO00238 502 aa10.01□□□□□ -0.81
HDAC1-203ENST00000463172 KRASP01116 189 aa10.01□□□□□ -0.81
HDAC1-203ENST00000463172 TRBV12-3P01733 135 aa10.01□□□□□ -0.81
HDAC1-203ENST00000463172 SERPINE2P07093 398 aa10.01□□□□□ -0.81
HDAC1-203ENST00000463172 PGAM2P15259 253 aa10.01□□□□□ -0.81
HDAC1-203ENST00000463172 ARL3P36405 182 aa10.01□□□□□ -0.81
HDAC1-203ENST00000463172 CLVS1Q8IUQ0 354 aaPredicted RBP10.01□□□□□ -0.81
HDAC1-203ENST00000463172 OR1L6Q8NGR2 347 aa10.01□□□□□ -0.81
HDAC1-203ENST00000463172 LSM10Q969L4 123 aaKnown RBP10.01□□□□□ -0.81
HDAC1-203ENST00000463172 TMEM56Q96MV1 263 aa10.01□□□□□ -0.81
HDAC1-203ENST00000463172 WWC2-AS2Q96NR7 200 aa10.01□□□□□ -0.81
HDAC1-203ENST00000463172 U3KQK5 164 aa10.01□□□□□ -0.81
HDAC1-203ENST00000463172 E7EUB6 86 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 REG1AP05451 166 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 RPA2P15927 270 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 MECP2P51608 486 aaKnown RBP10□□□□□ -0.81
HDAC1-203ENST00000463172 TMBIM6P55061 237 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 TAS2R19P59542 299 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 SSBP1Q04837 148 aaKnown RBP10□□□□□ -0.81
HDAC1-203ENST00000463172 KLK9Q2XQG4 91 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 RNASE12Q5GAN4 147 aaKnown RBP10□□□□□ -0.81
HDAC1-203ENST00000463172 C11orf87Q6NUJ2 197 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 H2BFWTQ7Z2G1 175 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 TBC1D26Q86UD7 250 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 OR5B3Q8NH48 314 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 OR4A16Q8NH70 328 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 FANCD2OSQ96PS1 177 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 HINT2Q9BX68 163 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 ZMAT4Q9H898 229 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 MTFP1Q9UDX5 166 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 KLK9Q9UKQ9 250 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 OR51B2Q9Y5P1 312 aa10□□□□□ -0.81
HDAC1-203ENST00000463172 IGLV11-55A0A075B6I3 123 aa9.99□□□□□ -0.81
HDAC1-203ENST00000463172 TRAV3A0A0B4J244 114 aa9.99□□□□□ -0.81
HDAC1-203ENST00000463172 TEX50A0A1B0GTY4 177 aa9.99□□□□□ -0.81
HDAC1-203ENST00000463172 IGLC7A0M8Q6 106 aa9.99□□□□□ -0.81
HDAC1-203ENST00000463172 GABARAPH6UMI1 98 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms