RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 CYB5BO43169 146 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 PGLYRP1O75594 196 aaPredicted RBP5.53□□□□□ -1.52
PTPRF-210ENST00000463041 NDUFB8O95169 186 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 OR2C1O95371 312 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 APOA1P02647 267 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 FCER2P06734 321 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 DEFA4P12838 97 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 F2RP25116 425 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 TGFBR1P36897 503 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 OR2B8PP59922 312 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 DEFB114Q30KQ6 69 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 FAM106AQ4KMX7 169 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 HSD17B13Q7Z5P4 300 aaPredicted RBP5.53□□□□□ -1.52
PTPRF-210ENST00000463041 GTSCR1Q86UQ5 136 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 HAPLN4Q86UW8 402 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 LYSMD2Q8IV50 215 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 LAX1Q8IWV1 398 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 CMTM1Q8IZ96 169 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 DMBX1Q8NFW5 382 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 OR5H2Q8NGV7 314 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 EEF1AKMT3Q96AZ1 226 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 MOB3AQ96BX8 217 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 CXorf58Q96LI9 332 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 TM2D3Q9BRN9 247 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 ZNF2Q9BSG1 426 aaPredicted RBP5.53□□□□□ -1.52
PTPRF-210ENST00000463041 THAP7Q9BT49 309 aaPredicted RBP5.53□□□□□ -1.52
PTPRF-210ENST00000463041 COMMD5Q9GZQ3 224 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 TUBA4BQ9H853 241 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 TECRQ9NZ01 308 aaKnown RBP5.53□□□□□ -1.52
PTPRF-210ENST00000463041 COMMD9Q9P000 198 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 THYN1Q9P016 225 aa5.53□□□□□ -1.52
PTPRF-210ENST00000463041 RYR3Q15413 4870 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 IGLV11-55A0A075B6I3 123 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 IZUMO1RA6ND01 250 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 C2orf70A6NJV1 201 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 CGB1A6NKQ9 187 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 ZNF785A8K8V0 405 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 GPR31O00270 319 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 PMP2P02689 132 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 CLEC3BP05452 202 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 TRAPPC2P0DI81 140 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 TRAPPC2BP0DI82 140 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 FOLR2P14207 255 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 AREGP15514 252 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 S100GP29377 79 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 RORCP51449 518 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 ERVK-16P61578 105 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 AADACL3Q5VUY0 350 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 THOC7Q6I9Y2 204 aaKnown RBP5.52□□□□□ -1.53
PTPRF-210ENST00000463041 CLEC19AQ6UXS0 136 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 ADAMTSL5Q6ZMM2 481 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 TMEM17Q86X19 198 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 OR1L8Q8NGR8 309 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 OR51H1Q8NH63 302 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 MUC7Q8TAX7 377 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 GPX8Q8TED1 209 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 DGCR14Q96DF8 476 aaKnown RBP5.52□□□□□ -1.53
PTPRF-210ENST00000463041 FUNDC2Q9BWH2 189 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 QTRT1Q9BXR0 403 aaKnown RBP5.52□□□□□ -1.53
PTPRF-210ENST00000463041 SCPEP1Q9HB40 452 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 FAM212BQ9NTI7 297 aaPredicted RBP5.52□□□□□ -1.53
PTPRF-210ENST00000463041 SLC2A8Q9NY64 477 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 FKBP11Q9NYL4 201 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 COMMD3Q9UBI1 195 aa5.52□□□□□ -1.53
PTPRF-210ENST00000463041 TRAV3A0A0B4J244 114 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 TEX50A0A1B0GTY4 177 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 IGLC7A0M8Q6 106 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 PPP5D1E7EU14 171 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 SNAPC5O75971 98 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 TPPPO94811 219 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 S1PR2O95136 353 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 REG1AP05451 166 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 EIF4EP06730 217 aaKnown RBP5.51□□□□□ -1.53
PTPRF-210ENST00000463041 SERPINE2P07093 398 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 MYOD1P15172 320 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 CBLN1P23435 193 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 PTBP1P26599 531 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPRF-210ENST00000463041 HRH1P35367 487 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 ARL3P36405 182 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 LPAR6P43657 344 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 UCP3P55916 312 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 VBP1P61758 197 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 TSPAN5P62079 268 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 HAGHQ16775 308 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 CD300EQ496F6 205 aaPredicted RBP5.51□□□□□ -1.53
PTPRF-210ENST00000463041 ZNF585BQ52M93 769 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 MZT2AQ6P582 158 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 VN1R17PQ8TDU5 208 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 DYNLRB2Q8TF09 96 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 CITED4Q96RK1 184 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 ATP6V0BQ99437 205 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 PALMDQ9NP74 551 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 NDUFA4L2Q9NRX3 87 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 TMEM140Q9NV12 185 aa5.51□□□□□ -1.53
PTPRF-210ENST00000463041 ZNF320A2RRD8 509 aa5.5□□□□□ -1.53
PTPRF-210ENST00000463041 MARCH11A6NNE9 402 aa5.5□□□□□ -1.53
PTPRF-210ENST00000463041 KRASP01116 189 aa5.5□□□□□ -1.53
PTPRF-210ENST00000463041 IGHV3-23P01764 117 aa5.5□□□□□ -1.53
PTPRF-210ENST00000463041 HLA-AP01891 365 aaKnown RBP5.5□□□□□ -1.53
PTPRF-210ENST00000463041 RLN1P04808 185 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms