RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TMEM267Q0VDI3 215 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 TNXAQ16473 311 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 LCE3BQ5TA77 95 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 PYHIN1Q6K0P9 492 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 TMEM65Q6PI78 240 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 ADAMTSL5Q6ZMM2 481 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 MMD2Q8IY49 270 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 SPAG16Q8N0X2 631 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 Q8N1Y9 231 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 POC5Q8NA72 575 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 ADAD2Q8NCV1 583 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 OR4D10Q8NGI6 311 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 OR51H1Q8NH63 302 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 TMEM167AQ8TBQ9 72 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 SMIM4Q8WVI0 70 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 MRGPRFQ96AM1 343 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 RHOVQ96L33 236 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 OR2A7Q96R45 310 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 DCUN1D5Q9BTE7 237 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 RSRP1Q9BUV0 290 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 TINAGL1Q9GZM7 467 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 ZMAT4Q9H898 229 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 PALMDQ9NP74 551 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 C19orf73Q9NVV2 129 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 VPS13DQ5THJ4 4388 aa6.06□□□□□ -1.44
CDC42BPA-210ENST00000462553 TRAV3A0A0B4J244 114 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 SCO2A0A1W2PP80 73 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 MSGN1A6NI15 193 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 A8MZ25 164 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 H3BUA1 57 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 GPR31O00270 319 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 CTDSPLO15194 276 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 RGS5O15539 181 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 NOL3O60936 208 aaKnown RBP6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 PGLYRP1O75594 196 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 CNIH1O95406 144 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 BRI3O95415 125 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 IGHV3-11P01762 117 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 ZNF735P0CB33 412 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 IGHV4-30-4P0DP06 118 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 UCP3P55916 312 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 TPPP2P59282 170 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 TAS2R31P59538 309 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 ZNF45Q02386 682 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 CATR1Q13166 79 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 ZNF585BQ52M93 769 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 PHLDA2Q53GA4 152 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 OR4A47Q6IF82 309 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 C19orf35Q6ZS72 473 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 SSX9Q7RTT3 188 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 TMEM229BQ8NBD8 167 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 OR5T1Q8NG75 326 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 OR6Q1Q8NGQ2 317 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 OR6F1Q8NGZ6 308 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 MS4A10Q96PG2 267 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 C6orf62Q9GZU0 229 aaPredicted RBP6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 BET1LQ9NYM9 111 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 COMMD9Q9P000 198 aa6.05□□□□□ -1.44
CDC42BPA-210ENST00000462553 HMX3A6NHT5 357 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 GSTZ1O43708 216 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 HPRT1P00492 218 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 HRASP01112 189 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 IGKV1-39P01597 117 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 IGLV1-51P01701 117 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 TRGV3P03979 118 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 IGKV1D-39P04432 117 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 OR9G9P0C7N8 305 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 NQO2P16083 231 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 TBPP20226 339 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 F2RP25116 425 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 RPL27AP46776 148 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 RND3P61587 244 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 MRPS10P82664 201 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 SSBP1Q04837 148 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 RNASE10Q5GAN6 216 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 FAAP20Q6NZ36 180 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 MCFD2Q8NI22 146 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 VSTM2AQ8TAG5 236 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 FCAMRQ8WWV6 532 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 DGCR14Q96DF8 476 aaKnown RBP6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 DIRAS2Q96HU8 199 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 TMEM68Q96MH6 324 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 THAP7Q9BT49 309 aaPredicted RBP6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 SLA2Q9H6Q3 261 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 PLEKHA2Q9HB19 425 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 TMEM140Q9NV12 185 aa6.04□□□□□ -1.44
CDC42BPA-210ENST00000462553 TRBV9A0A0B4J1U6 114 aa6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 IGLC7A0M8Q6 106 aa6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 MARCH11A6NNE9 402 aa6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 ZNF701M0R085 212 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 UPK2O00526 184 aa6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 CREBL2O60519 120 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 TRBV12-3P01733 135 aa6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 PRH1P02810 166 aa6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 HSPB1P04792 205 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 RPA2P15927 270 aa6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 HLA-GP17693 338 aa6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 PI3P19957 117 aa6.03□□□□□ -1.44
CDC42BPA-210ENST00000462553 PTBP1P26599 531 aaKnown RBP eCLIP6.03□□□□□ -1.444e-26■■■□□ 16.4
CDC42BPA-210ENST00000462553 TNFSF8P32971 234 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms