RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 MED13LQ71F56 2210 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 FASNP49327 2511 aaKnown RBP3.71□□□□□ -1.82
CSMD3-205ENST00000462254 IGHV4-30-2A0A087WSY4 118 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 IGHV4-61A0A0C4DH41 118 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 IGHV2-70DA0A0C4DH43 119 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 IGKV1-6A0A0C4DH72 117 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 A0A1W2PRD5 423 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 TMEM30CPA0ZSE6 113 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 SIVA1O15304 175 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 LYRM1O43325 122 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 IGHV2-5P01817 119 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 IGHV4-59P01825 116 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 MT-ND4P03905 459 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 CD74P04233 296 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 WNT2P09544 360 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 SCTP09683 121 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 AKAIN1P0CW23 69 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 CGB3P0DN86 165 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 CGB7P0DN87 165 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 IGHV4-38-2P0DP08 117 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 GATA1P15976 413 aaPredicted RBP3.71□□□□□ -1.82
CSMD3-205ENST00000462254 SPNP16150 400 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 HLA-DMAP28067 261 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 ERP29P30040 261 aaKnown RBP3.71□□□□□ -1.82
CSMD3-205ENST00000462254 SSTR5P35346 364 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 HRH1P35367 487 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 GLP1RP43220 463 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 CBX5P45973 191 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 INPP1P49441 399 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 HOXA1P49639 335 aaPredicted RBP3.71□□□□□ -1.82
CSMD3-205ENST00000462254 PDLIM4P50479 330 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 EDDM3BP56851 147 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 TMEM33P57088 247 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 TAS2R19P59542 299 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 HLA-DRB3P79483 266 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 LCN2P80188 198 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 ASAH1Q13510 395 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 HMGN3Q15651 99 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 DEFB113Q30KQ7 82 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 TMEM155Q4W5P6 130 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 Q6ZS49 121 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 GDPD3Q7L5L3 318 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 SLC36A1Q7Z2H8 476 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 KIR3DL3Q8N743 410 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 INO80EQ8NBZ0 244 aaPredicted RBP3.71□□□□□ -1.82
CSMD3-205ENST00000462254 OR5AP2Q8NGF4 316 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 OR56B4Q8NH76 319 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 CLDND2Q8NHS1 167 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 UBALD1Q8TB05 177 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 MRGPRDQ8TDS7 321 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 C10orf105Q8TEF2 133 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 MED30Q96HR3 178 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 C2orf48Q96LS8 159 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 CABLES2Q9BTV7 478 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 HIPK2Q9H2X6 1198 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 ZNF286AQ9HBT8 521 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 HRASLSQ9HDD0 168 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 C19orf12Q9NSK7 152 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 TAS2R8Q9NYW2 309 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 ZNF107Q9UII5 783 aaPredicted RBP3.71□□□□□ -1.82
CSMD3-205ENST00000462254 ANXA10Q9UJ72 324 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 MMP24Q9Y5R2 645 aa3.71□□□□□ -1.82
CSMD3-205ENST00000462254 NBPF19A0A087WUL8 3843 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 MEIKINA0A087WXM9 373 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 A0A096LNT2 108 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 ODAMA1E959 279 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 ZNF736B4DX44 427 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-205ENST00000462254 TRDCB7Z8K6 153 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 C12orf77C9JDV5 145 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 C15orf65H3BRN8 121 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 SDCBPO00560 298 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-205ENST00000462254 PHF1O43189 567 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-205ENST00000462254 NDUFB3O43676 98 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 NDUFA2O43678 99 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 NDUFS6O75380 124 aaKnown RBP3.7□□□□□ -1.82
CSMD3-205ENST00000462254 RAB3DO95716 219 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 TSPAN13O95857 204 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 PMP2P02689 132 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 IGKV2-30P06310 120 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 CCL3L1P16619 93 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 IL2RGP31785 369 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 GPR183P32249 361 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 ID1P41134 155 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 CCR6P51684 374 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 AP3S2P59780 193 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 LMO4P61968 165 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 GNB2P62879 340 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 LAGE3Q14657 143 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 CDK10Q15131 360 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 KCNJ8Q15842 424 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 C17orf58Q2M2W7 97 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 LRRC10Q5BKY1 277 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 RNASE10Q5GAN6 216 aaKnown RBP3.7□□□□□ -1.82
CSMD3-205ENST00000462254 VAX1Q5SQQ9 334 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 WDR25Q64LD2 544 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-205ENST00000462254 ZNF660Q6AZW8 331 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-205ENST00000462254 FAM53AQ6NSI3 398 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-205ENST00000462254 SLC25A48Q6ZT89 311 aaKnown RBP3.7□□□□□ -1.82
CSMD3-205ENST00000462254 MOB1BQ7L9L4 216 aa3.7□□□□□ -1.82
CSMD3-205ENST00000462254 SELENOHQ8IZQ5 122 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms