RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 TMEM136Q6ZRR5 245 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 FAM19A2Q8N3H0 131 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 C5orf30Q96GV9 206 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 TRGV10A0A0A0MS01 117 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 IGHV1-45A0A0A0MS14 117 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 MAJINQ3KP22 176 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 MIC13Q5XKP0 118 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 TREML4Q6UXN2 200 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 C19orf35Q6ZS72 473 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 IGHV2-70DA0A0C4DH43 119 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 CA2P00918 260 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 GCHFRP30047 84 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 SRIP30626 198 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 EIF4EBP1Q13541 118 aaPredicted RBP12.88□□□□□ -0.35
SSR4-206ENST00000460616 STUMQ69YW2 141 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 ALKBH2Q6NS38 261 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 RPS19BP1Q86WX3 136 aaKnown RBP12.88□□□□□ -0.35
SSR4-206ENST00000460616 POM121L2Q96KW2 1035 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 IMMP1LQ96LU5 166 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 KCNIP1Q9NZI2 227 aa12.88□□□□□ -0.35
SSR4-206ENST00000460616 LOC102723996A0A087X1L8 192 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 SS18L1O75177 396 aaPredicted RBP12.87□□□□□ -0.35
SSR4-206ENST00000460616 NTF3P20783 257 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 SLC35B1P78383 322 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 FAM53AQ6NSI3 398 aaPredicted RBP12.87□□□□□ -0.35
SSR4-206ENST00000460616 OR5B3Q8NH48 314 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 TSKUQ8WUA8 353 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 GALMQ96C23 342 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 MGST2Q99735 147 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 IGHV2-26A0A0B4J1V2 119 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 A0A0G2JMM0 328 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 A0A1W2PPB8 328 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 A0A1W2PRS3 328 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 ZNF503-AS2A6NEH8 195 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 KIR3DP1A8MWS1 328 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 J3QT63 122 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 TNFSF4P23510 183 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 PMCHL1Q16048 86 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 COX19Q49B96 90 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 WIPI1Q5MNZ9 446 aaPredicted RBP12.87□□□□□ -0.35
SSR4-206ENST00000460616 C11orf52Q96A22 123 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 GSX1Q9H4S2 264 aaPredicted RBP12.87□□□□□ -0.35
SSR4-206ENST00000460616 CDC42EP3Q9UKI2 254 aa12.87□□□□□ -0.35
SSR4-206ENST00000460616 TNFSF15O95150 251 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 RFPL3SP0C7P2 107 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 VASH2Q86V25 355 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 ZNF439Q8NDP4 499 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 OR52L2PQ8NGH6 319 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 GGTLC1Q9BX51 225 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 BMPR1BO00238 502 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 MT-CO2P00403 227 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 GNG4P50150 75 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 LCN12Q6JVE5 192 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 PNKDQ8N490 385 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 CLEC7AQ9BXN2 247 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 MS4A5Q9H3V2 200 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 ZFHX4Q86UP3 3567 aa12.86□□□□□ -0.35
SSR4-206ENST00000460616 HELTA6NFD8 242 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 COX6A1P12074 109 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 LINC00205P59089 165 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 TAAR6Q96RI8 345 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 SEPSECSQ9HD40 501 aaKnown RBP12.85□□□□□ -0.35
SSR4-206ENST00000460616 KIAA1549Q9HCM3 1950 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 IGHV1-69-2A0A0G2JMI3 117 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 A0A1W2PN81 502 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 CDIPTO14735 213 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 FOXH1O75593 365 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 NXPH2O95156 264 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 P04436 131 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 FOXG1P55316 489 aaPredicted RBP12.85□□□□□ -0.35
SSR4-206ENST00000460616 TCL1AP56279 114 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 CLDN18P56856 261 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 AARDQ4LEZ3 155 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 MRGPRDQ8TDS7 321 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 SSMEM1Q8WWF3 244 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 TMEM45BQ96B21 275 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 RNASE7Q9H1E1 156 aaKnown RBP12.85□□□□□ -0.35
SSR4-206ENST00000460616 PIEZO1Q92508 2521 aa12.85□□□□□ -0.35
SSR4-206ENST00000460616 DIDO1Q9BTC0 2240 aaKnown RBP12.85□□□□□ -0.35
SSR4-206ENST00000460616 IGLC7A0M8Q6 106 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 WISP2O76076 250 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 CYC1P08574 325 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 OR10J4P0C629 311 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 VAMP3Q15836 100 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 NINJ1Q92982 152 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 WDR54Q9H977 334 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 TRAV9-2A0A087WT02 112 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 C12orf77C9JDV5 145 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 HLA-DQA1P01909 254 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 AMY1AP04745 511 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 RHOBP62745 196 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 FXYD3Q14802 87 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 EFNB3Q15768 340 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 CENPWQ5EE01 88 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 SPATA31B1PQ5VZV4 182 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 PQLC2Q6ZP29 291 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 DOLPP1Q86YN1 238 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 SPRY4Q9C004 299 aa12.84□□□□□ -0.35
SSR4-206ENST00000460616 HEYLQ9NQ87 328 aaPredicted RBP12.84□□□□□ -0.35
SSR4-206ENST00000460616 TNRC6AQ8NDV7 1962 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms