RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 FOXE3Q13461 319 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 SLC25A42Q86VD7 318 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 LFNGQ8NES3 379 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 IL22RA2Q969J5 263 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 TMEM56Q96MV1 263 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 PHB2Q99623 299 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 TMEM56-RWDD3S4R434 201 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 MSGN1A6NI15 193 aa17.6■□□□□ 0.41
C9orf3-209ENST00000460573 SLC6A1P30531 599 aa17.6■□□□□ 0.41
C9orf3-209ENST00000460573 RPL27AP46776 148 aaKnown RBP17.6■□□□□ 0.41
C9orf3-209ENST00000460573 SUPT4H1P63272 117 aaKnown RBP17.6■□□□□ 0.41
C9orf3-209ENST00000460573 SRPXP78539 464 aa17.6■□□□□ 0.41
C9orf3-209ENST00000460573 DEFA6Q01524 100 aa17.6■□□□□ 0.41
C9orf3-209ENST00000460573 C10orf99Q6UWK7 81 aa17.6■□□□□ 0.41
C9orf3-209ENST00000460573 ZNF695Q8IW36 515 aa17.6■□□□□ 0.41
C9orf3-209ENST00000460573 C11orf44Q8N8P7 122 aa17.6■□□□□ 0.41
C9orf3-209ENST00000460573 OR5M8Q8NGP6 311 aa17.6■□□□□ 0.41
C9orf3-209ENST00000460573 RBPMSQ93062 196 aaKnown RBP17.6■□□□□ 0.41
C9orf3-209ENST00000460573 COMMD5Q9GZQ3 224 aa17.6■□□□□ 0.41
C9orf3-209ENST00000460573 FKBP11Q9NYL4 201 aa17.6■□□□□ 0.41
C9orf3-209ENST00000460573 PRNDQ9UKY0 176 aa17.6■□□□□ 0.41
C9orf3-209ENST00000460573 FOXA2Q9Y261 457 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-209ENST00000460573 IGLV1-40P01703 118 aa17.59■□□□□ 0.41
C9orf3-209ENST00000460573 AKR1C2P52895 323 aa17.59■□□□□ 0.41
C9orf3-209ENST00000460573 TMEM187Q14656 261 aa17.59■□□□□ 0.41
C9orf3-209ENST00000460573 CXorf66Q5JRM2 361 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-209ENST00000460573 FAM219AQ8IW50 185 aa17.59■□□□□ 0.41
C9orf3-209ENST00000460573 RNF152Q8N8N0 203 aa17.59■□□□□ 0.41
C9orf3-209ENST00000460573 RRNAD1Q96FB5 475 aaKnown RBP17.59■□□□□ 0.41
C9orf3-209ENST00000460573 TBC1D24Q9ULP9 559 aa17.59■□□□□ 0.41
C9orf3-209ENST00000460573 TSSC4Q9Y5U2 329 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-209ENST00000460573 TRAV3A0A0B4J244 114 aa17.58■□□□□ 0.4
C9orf3-209ENST00000460573 A0A1W2PN81 502 aa17.58■□□□□ 0.4
C9orf3-209ENST00000460573 TCRBV4S1A1TA0A5B7 111 aa17.58■□□□□ 0.4
C9orf3-209ENST00000460573 PLXNB1O43157 2135 aa17.58■□□□□ 0.4
C9orf3-209ENST00000460573 CHRNA7P36544 502 aa17.58■□□□□ 0.4
C9orf3-209ENST00000460573 C2orf68Q2NKX9 166 aa17.58■□□□□ 0.4
C9orf3-209ENST00000460573 TCTEX1D4Q5JR98 221 aa17.58■□□□□ 0.4
C9orf3-209ENST00000460573 THOC7Q6I9Y2 204 aaKnown RBP17.58■□□□□ 0.4
C9orf3-209ENST00000460573 NDUFA11Q86Y39 141 aa17.58■□□□□ 0.4
C9orf3-209ENST00000460573 CITED2Q99967 270 aaPredicted RBP17.58■□□□□ 0.4
C9orf3-209ENST00000460573 ZFP57Q9NU63 452 aa17.58■□□□□ 0.4
C9orf3-209ENST00000460573 TET2Q6N021 2002 aaPredicted RBP17.58■□□□□ 0.4
C9orf3-209ENST00000460573 FAM240BA0A1B0GVZ2 78 aa17.57■□□□□ 0.4
C9orf3-209ENST00000460573 H3BUA1 57 aa17.57■□□□□ 0.4
C9orf3-209ENST00000460573 PTTG1O95997 202 aa17.57■□□□□ 0.4
C9orf3-209ENST00000460573 TCRBP04435 133 aa17.57■□□□□ 0.4
C9orf3-209ENST00000460573 OR9G9P0C7N8 305 aa17.57■□□□□ 0.4
C9orf3-209ENST00000460573 PSMB8P28062 276 aa17.57■□□□□ 0.4
C9orf3-209ENST00000460573 TMEM268Q5VZI3 342 aa17.57■□□□□ 0.4
C9orf3-209ENST00000460573 TMEM65Q6PI78 240 aa17.57■□□□□ 0.4
C9orf3-209ENST00000460573 SELENOHQ8IZQ5 122 aaKnown RBP17.57■□□□□ 0.4
C9orf3-209ENST00000460573 LGI3Q8N145 548 aa17.57■□□□□ 0.4
C9orf3-209ENST00000460573 OR4A16Q8NH70 328 aa17.57■□□□□ 0.4
C9orf3-209ENST00000460573 SRSF8Q9BRL6 282 aaKnown RBP17.57■□□□□ 0.4
C9orf3-209ENST00000460573 C15orf61A6NNL5 157 aa17.56■□□□□ 0.4
C9orf3-209ENST00000460573 SFT2D2O95562 160 aa17.56■□□□□ 0.4
C9orf3-209ENST00000460573 IGKV1-5P01602 117 aa17.56■□□□□ 0.4
C9orf3-209ENST00000460573 P0C879 139 aa17.56■□□□□ 0.4
C9orf3-209ENST00000460573 VAMP1P23763 118 aa17.56■□□□□ 0.4
C9orf3-209ENST00000460573 C10orf55Q5SWW7 151 aa17.56■□□□□ 0.4
C9orf3-209ENST00000460573 ASPHD1Q5U4P2 390 aa17.56■□□□□ 0.4
C9orf3-209ENST00000460573 OR1L8Q8NGR8 309 aa17.56■□□□□ 0.4
C9orf3-209ENST00000460573 OR5B3Q8NH48 314 aa17.56■□□□□ 0.4
C9orf3-209ENST00000460573 RNASE11Q8TAA1 199 aaKnown RBP17.56■□□□□ 0.4
C9orf3-209ENST00000460573 FYTTD1Q96QD9 318 aaKnown RBP17.56■□□□□ 0.4
C9orf3-209ENST00000460573 ALX4Q9H161 411 aaPredicted RBP17.56■□□□□ 0.4
C9orf3-209ENST00000460573 TMEM14BQ9NUH8 114 aa17.56■□□□□ 0.4
C9orf3-209ENST00000460573 FLVCR2Q9UPI3 526 aa17.56■□□□□ 0.4
C9orf3-209ENST00000460573 BRI3O95415 125 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 OR2B8PP59922 312 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 PPP1R1AQ13522 171 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 OXA1LQ15070 435 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 HSD17B13Q7Z5P4 300 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-209ENST00000460573 ZNF429Q86V71 674 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 TTC9CQ8N5M4 171 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 LHFPL5Q8TAF8 219 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 FAM110DQ8TAY7 271 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-209ENST00000460573 LSM10Q969L4 123 aaKnown RBP17.55■□□□□ 0.4
C9orf3-209ENST00000460573 QTRT1Q9BXR0 403 aaKnown RBP17.55■□□□□ 0.4
C9orf3-209ENST00000460573 C20orf85Q9H1P6 137 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 SLA2Q9H6Q3 261 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 ZNF257Q9Y2Q1 563 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 OR51B2Q9Y5P1 312 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 TNCP24821 2201 aa17.55■□□□□ 0.4
C9orf3-209ENST00000460573 A0A0B4J2A0 478 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 TEX50A0A1B0GTY4 177 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 DUXBA0A1W2PPF3 345 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 TEX22C9J3V5 150 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 SOX15O60248 233 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 OR4E1P0C645 316 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 PF4V1P10720 104 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 RAB9AP51151 201 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 RAB25P57735 213 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 LRTM2Q8N967 370 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 SHPKQ9UHJ6 478 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 NSG2Q9Y328 171 aa17.54■□□□□ 0.4
C9orf3-209ENST00000460573 TRRAPQ9Y4A5 3859 aa17.53■□□□□ 0.4
C9orf3-209ENST00000460573 E7EUB6 86 aa17.53■□□□□ 0.4
C9orf3-209ENST00000460573 RBMXL2O75526 392 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms