RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 TNXAQ16473 311 aa8.75□□□□□ -1.01
SMNDC1-203ENST00000460483 AKIRIN2Q53H80 203 aa8.75□□□□□ -1.01
SMNDC1-203ENST00000460483 CENPVQ7Z7K6 275 aaPredicted RBP8.75□□□□□ -1.01
SMNDC1-203ENST00000460483 NOXA1Q86UR1 476 aa8.75□□□□□ -1.01
SMNDC1-203ENST00000460483 VKORC1L1Q8N0U8 176 aa8.75□□□□□ -1.01
SMNDC1-203ENST00000460483 SLC35G3Q8N808 338 aa8.75□□□□□ -1.01
SMNDC1-203ENST00000460483 UXS1Q8NBZ7 420 aa8.75□□□□□ -1.01
SMNDC1-203ENST00000460483 OR1L6Q8NGR2 347 aa8.75□□□□□ -1.01
SMNDC1-203ENST00000460483 OR1L8Q8NGR8 309 aa8.75□□□□□ -1.01
SMNDC1-203ENST00000460483 TLN2Q9Y4G6 2542 aa8.75□□□□□ -1.01
SMNDC1-203ENST00000460483 CLPSL1A2RUU4 121 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 C15orf61A6NNL5 157 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 FAM90A26D6RGX4 464 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 MED6O75586 246 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 CRYGBP07316 175 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 RPL27AP46776 148 aaKnown RBP8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 SUB1P53999 127 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 HSPE1P61604 102 aaKnown RBP8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 BLCAPP62952 87 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 ERHP84090 104 aaKnown RBP8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 SMCO1Q147U7 214 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 OXA1LQ15070 435 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 TATDN3Q17R31 274 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 OR52E5Q8NH55 327 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 OR1S1Q8NH92 325 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 SGMS2Q8NHU3 365 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 RITA1Q96K30 269 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 QTRT1Q9BXR0 403 aaKnown RBP8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 ZNF430Q9H8G1 570 aaPredicted RBP8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 PARP11Q9NR21 331 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 FOXA2Q9Y261 457 aaPredicted RBP8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 OR51B2Q9Y5P1 312 aa8.74□□□□□ -1.01
SMNDC1-203ENST00000460483 TMEM89A2RUT3 159 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 WRBO00258 174 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 IL6RP08887 468 aaPredicted RBP8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 TRAPPC2P0DI81 140 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 TRAPPC2BP0DI82 140 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 CNTFRP26992 372 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 ATP5IP56385 69 aaPredicted RBP8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 SPCS3P61009 180 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 RPP30P78346 268 aaKnown RBP8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 GSG1LQ6UXU4 331 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 Q6ZSV7 163 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 LYZL2Q7Z4W2 148 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 OR4X2Q8NGF9 303 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 OR5M8Q8NGP6 311 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 SRSF12Q8WXF0 261 aaKnown RBP8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 ASB13Q8WXK3 278 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 CIB3Q96Q77 187 aaPredicted RBP8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 HIPK2Q9H2X6 1198 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 PLEKHA3Q9HB20 300 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 TMEM14BQ9NUH8 114 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 THYN1Q9P016 225 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 RNF114Q9Y508 228 aa8.73□□□□□ -1.01
SMNDC1-203ENST00000460483 IGHV7-81A0A0B4J1V7 117 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 TRAV41A0A0B4J266 112 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 C5orf51A6NDU8 294 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 H3BUA1 57 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 IGKV1-39P01597 117 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 IGKV1D-39P04432 117 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 AMY1AP04745 511 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 HOXB5P09067 269 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 DEFA4P12838 97 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 SNCAP37840 140 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 ANKRD55Q3KP44 614 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 FAM209BQ5JX69 171 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 TEX38Q6PEX7 206 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 TMEM65Q6PI78 240 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 STPG2Q8N412 459 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 GRPEL2Q8TAA5 225 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 FYTTD1Q96QD9 318 aaKnown RBP8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 MED28Q9H204 178 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 SLA2Q9H6Q3 261 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 ZNF702PQ9H963 129 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 CACNG5Q9UF02 275 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 SVEP1Q4LDE5 3571 aa8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 NSD1Q96L73 2696 aaPredicted RBP8.72□□□□□ -1.01
SMNDC1-203ENST00000460483 C13orf42A0A1B0GVH6 325 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 C7orf66A4D0T2 115 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 PSMB11A5LHX3 300 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 MSGN1A6NI15 193 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 FCN1O00602 326 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 SCAF4O95104 1147 aaKnown RBP8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 IGKV1-5P01602 117 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 ELANEP08246 267 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 PET100P0DJ07 73 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 HIST1H1BP16401 226 aaKnown RBP8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 PVALBP20472 110 aaPredicted RBP8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 CRIP2P52943 208 aaPredicted RBP8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 NMSQ5H8A3 153 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 GGNBP1Q5YKI7 109 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 UNQ5815/PRO19632Q6UWF5 114 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 LINC01006Q8NI28 216 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 GPR146Q96CH1 333 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 SEC22CQ9BRL7 303 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 HINT2Q9BX68 163 aa8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 SONP18583 2426 aaKnown RBP8.71□□□□□ -1.02
SMNDC1-203ENST00000460483 A0A0G2JLM5 398 aa8.7□□□□□ -1.02
SMNDC1-203ENST00000460483 TEX50A0A1B0GTY4 177 aa8.7□□□□□ -1.02
SMNDC1-203ENST00000460483 DBX1A6NMT0 343 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms