RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CIARTQ8N365 385 aaPredicted RBP4.36□□□□□ -1.71
VPS41-209ENST00000457055 ANKRD29Q8N6D5 301 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 GVQW1Q8N7I0 195 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 STPG4Q8N801 248 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 TMEM105Q8N8V8 129 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 OR2A12Q8NGT7 310 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 SPATA3Q8NHX4 192 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 STARD4Q96DR4 205 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 OR2A7Q96R45 310 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 HIST1H2BLQ99880 126 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 TMEM147Q9BVK8 224 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 C19orf24Q9BVV8 132 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 RAB6CQ9H0N0 254 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 EDA2RQ9HAV5 297 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 ZNF331Q9NQX6 463 aaPredicted RBP4.36□□□□□ -1.71
VPS41-209ENST00000457055 KCNIP2Q9NS61 270 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 RPRMQ9NS64 109 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 FKBP11Q9NYL4 201 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 TAAR2Q9P1P5 351 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 UQCR10Q9UDW1 63 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 RIMS3Q9UJD0 308 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 KLF13Q9Y2Y9 288 aaPredicted RBP4.36□□□□□ -1.71
VPS41-209ENST00000457055 FLVCR1Q9Y5Y0 555 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 OTOGLQ3ZCN5 2332 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 DOCK8Q8NF50 2099 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 SHROOM3Q8TF72 1996 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 A6NDN8 102 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 GGT3PA6NGU5 568 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 FAM183AA6NL82 134 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 GGTLC3B5MD39 225 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 ZNF670-ZNF695F2Z2N8 137 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 SOCS2O14508 198 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 ZZEF1O43149 2961 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 CA2P00918 260 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 SLC35G6P0C7Q6 338 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 IGLC6P0CF74 106 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 T-ENOLP0DO92 83 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 BCL2P10415 239 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 FOXA1P55317 472 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 HBG1P69891 147 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 HBG2P69892 147 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 SLC38A11Q08AI6 406 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 CATR1Q13166 79 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 C1DQ13901 141 aaKnown RBP4.35□□□□□ -1.71
VPS41-209ENST00000457055 ZNF726P1Q15940 193 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 VAX1Q5SQQ9 334 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 RUSC1-AS1Q66K80 236 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 CNIH2Q6PI25 160 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 IGFL2Q6UWQ7 119 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 Q6ZWC4 215 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 TCF23Q7RTU1 214 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 ZNF429Q86V71 674 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 P2RY8Q86VZ1 359 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 EXOC3-AS1Q8N2X6 119 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 FTMTQ8N4E7 242 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 OR51G1Q8NGK1 321 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 OR8S1Q8NH09 359 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 OR10G6Q8NH81 332 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 IL1F10Q8WWZ1 152 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 SLC25A46Q96AG3 418 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 WDR61Q9GZS3 305 aaKnown RBP4.35□□□□□ -1.71
VPS41-209ENST00000457055 TMEM191AQ9H0A3 160 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 ASH1LQ9NR48 2969 aaKnown RBP4.35□□□□□ -1.71
VPS41-209ENST00000457055 WRAP73Q9P2S5 460 aaPredicted RBP4.35□□□□□ -1.71
VPS41-209ENST00000457055 ZNF580Q9UK33 172 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 ZNF443Q9Y2A4 671 aaPredicted RBP4.35□□□□□ -1.71
VPS41-209ENST00000457055 NOP16Q9Y3C1 178 aaKnown RBP4.35□□□□□ -1.71
VPS41-209ENST00000457055 ORC6Q9Y5N6 252 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 BPTFQ12830 3046 aa4.35□□□□□ -1.71
VPS41-209ENST00000457055 TICRRQ7Z2Z1 1910 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 hCG_1818297A0A087WSY0 165 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 TRBV5-7A0A0A0MS05 114 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 A0A0A6YYD4 124 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 A0A0G2JK05 382 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 LOC107984640A0A0U1RRK4 108 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 NCBP2LA6PVI3 153 aaKnown RBP4.34□□□□□ -1.71
VPS41-209ENST00000457055 A8MT66 165 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 H3BQ15 152 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 CDX4O14627 284 aaPredicted RBP4.34□□□□□ -1.71
VPS41-209ENST00000457055 NEURL1O76050 574 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 NCR2O95944 276 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 IGHG2P01859 326 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 IGHMP01871 453 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 WNT1P04628 370 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 CD1DP15813 335 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 RPS4Y1P22090 263 aaKnown RBP4.34□□□□□ -1.71
VPS41-209ENST00000457055 NFYBP25208 207 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 PPP1CCP36873 323 aaKnown RBP4.34□□□□□ -1.71
VPS41-209ENST00000457055 SNCAP37840 140 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 CTRLP40313 264 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 DIO3P55073 304 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
VPS41-209ENST00000457055 RPS18P62269 152 aaKnown RBP4.34□□□□□ -1.71
VPS41-209ENST00000457055 BTG1P62324 171 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 KLRD1Q13241 179 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 ARFRP1Q13795 201 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 HES1Q14469 280 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 OR7A5Q15622 319 aa4.34□□□□□ -1.71
VPS41-209ENST00000457055 ECSCRQ19T08 205 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms