RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TMEM68Q96MH6 324 aa7.85□□□□□ -1.15
ATG4A-206ENST00000457035 SLC25A21Q9BQT8 299 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-206ENST00000457035 CCDC32Q9BV29 185 aa7.85□□□□□ -1.15
ATG4A-206ENST00000457035 KLK15Q9H2R5 256 aa7.85□□□□□ -1.15
ATG4A-206ENST00000457035 ZFP57Q9NU63 452 aa7.85□□□□□ -1.15
ATG4A-206ENST00000457035 TMEM140Q9NV12 185 aa7.85□□□□□ -1.15
ATG4A-206ENST00000457035 TSSC4Q9Y5U2 329 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-206ENST00000457035 TEX13DA0A0J9YY54 714 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-206ENST00000457035 LINC00854A0A1B0GVQ3 168 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 CGB1A6NKQ9 187 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 CREBL2O60519 120 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-206ENST00000457035 B3GALNT1O75752 331 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 CDS2O95674 445 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 OPN1MWP04001 364 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 SERPINE2P07093 398 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 FGF2P09038 288 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 OR9G9P0C7N8 305 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 OPN1MW2P0DN77 364 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 OPN1MW3P0DN78 364 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 MYOD1P15172 320 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 HLA-GP17693 338 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 BTCP35070 178 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 INPP1P49441 399 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 RAB9AP51151 201 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 CCR6P51684 374 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 SUPT4H1P63272 117 aaKnown RBP7.84□□□□□ -1.15
ATG4A-206ENST00000457035 NSUN5P1Q3KNT7 163 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 C10orf55Q5SWW7 151 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 DMBX1Q8NFW5 382 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 MYOZ3Q8TDC0 251 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 GALNT14Q96FL9 552 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 C7orf50Q9BRJ6 194 aaKnown RBP7.84□□□□□ -1.15
ATG4A-206ENST00000457035 TMEM222Q9H0R3 208 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 NAA60Q9H7X0 242 aa7.84□□□□□ -1.15
ATG4A-206ENST00000457035 A0A1W2PN81 502 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 TEX22C9J3V5 150 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 M0QZ24 198 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 ACTL6BO94805 426 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 BRI3O95415 125 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 IGKV1-5P01602 117 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 OR5AC1P0C628 307 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 P0C879 139 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 AKR1C4P17516 323 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 CHRNA7P36544 502 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 CDX1P47902 265 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-206ENST00000457035 OR2B8PP59922 312 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 ERVK-16P61578 105 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 RPL23AP62750 156 aaKnown RBP7.83□□□□□ -1.16
ATG4A-206ENST00000457035 DHODHQ02127 395 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 TMEM187Q14656 261 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 ZNF846Q147U1 533 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 CXorf66Q5JRM2 361 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-206ENST00000457035 C18orf65Q6ZTR6 163 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 C8orf86Q6ZUL3 223 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 TTC9CQ8N5M4 171 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 OR5T1Q8NG75 326 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 OR5M8Q8NGP6 311 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 LHFPL5Q8TAF8 219 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 SPIN2AQ99865 258 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 SPIN2BQ9BPZ2 258 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 WDR12Q9GZL7 423 aaKnown RBP7.83□□□□□ -1.16
ATG4A-206ENST00000457035 FOXA2Q9Y261 457 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-206ENST00000457035 KCNIP3Q9Y2W7 256 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 NSG2Q9Y328 171 aa7.83□□□□□ -1.16
ATG4A-206ENST00000457035 TEX50A0A1B0GTY4 177 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 A0A1W2PRX2 142 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 HMX3A6NHT5 357 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 DBX1A6NMT0 343 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 CENPXA8MT69 81 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 LYRM1O43325 122 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 NDUFB6O95139 128 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 TSPAN15O95858 294 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 APELAP0DMC3 54 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 PF4V1P10720 104 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 RPL27AP46776 148 aaKnown RBP7.82□□□□□ -1.16
ATG4A-206ENST00000457035 DEFA6Q01524 100 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 IFITM3Q01628 133 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 RBMS2Q15434 407 aaKnown RBP7.82□□□□□ -1.16
ATG4A-206ENST00000457035 C2orf68Q2NKX9 166 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 TMEM128Q5BJH2 165 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 TMEM65Q6PI78 240 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 H2BFWTQ7Z2G1 175 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 SLC25A42Q86VD7 318 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 SGPP2Q8IWX5 399 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 SELENOHQ8IZQ5 122 aaKnown RBP7.82□□□□□ -1.16
ATG4A-206ENST00000457035 ZNF491Q8N8L2 437 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 CASTOR1Q8WTX7 329 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 TMEM56Q96MV1 263 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 TMEM56-RWDD3S4R434 201 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 NOTCH1P46531 2555 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 MEGF8Q7Z7M0 2845 aa7.82□□□□□ -1.16
ATG4A-206ENST00000457035 A0A0B4J293 547 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 H3BUA1 57 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 UPK1BO75841 260 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 SNAPC5O75971 98 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 CRYGCP07315 174 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 IZUMO4Q1ZYL8 232 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 TRIM16LQ309B1 348 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 KHDC1LQ5JSQ8 128 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 Q6ZRM9 215 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms