RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 TCTEX1D2Q8WW35 142 aa13.84□□□□□ -0.19
MSH6-206ENST00000455383 ZNF436Q9C0F3 470 aaPredicted RBP13.84□□□□□ -0.19
MSH6-206ENST00000455383 DCSTAMPQ9H295 470 aa13.84□□□□□ -0.19
MSH6-206ENST00000455383 BET1LQ9NYM9 111 aa13.84□□□□□ -0.19
MSH6-206ENST00000455383 UFC1Q9Y3C8 167 aa13.84□□□□□ -0.19
MSH6-206ENST00000455383 HECTD4Q9Y4D8 3996 aa13.83□□□□□ -0.19
MSH6-206ENST00000455383 DNAH6Q9C0G6 4158 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 TSPAN4O14817 238 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 RGS10O43665 173 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 HRASP01112 189 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 REG1AP05451 166 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 HLA-GP17693 338 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 OR2B8PP59922 312 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 CDNFQ49AH0 187 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 HACD4Q5VWC8 232 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 LGALS9CQ6DKI2 356 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 CNIH2Q6PI25 160 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 ZNF66Q6ZN08 573 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 SLC38A6Q8IZM9 456 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 OR4A5Q8NH83 315 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 SPATA2Q9UM82 520 aa13.83□□□□□ -0.2
MSH6-206ENST00000455383 CRHBPP24387 322 aa13.82□□□□□ -0.2
MSH6-206ENST00000455383 GPR183P32249 361 aa13.82□□□□□ -0.2
MSH6-206ENST00000455383 ODF3L2Q3SX64 289 aa13.82□□□□□ -0.2
MSH6-206ENST00000455383 ATG5Q9H1Y0 275 aa13.82□□□□□ -0.2
MSH6-206ENST00000455383 VCXQ9H320 206 aa13.82□□□□□ -0.2
MSH6-206ENST00000455383 UBQLN2Q9UHD9 624 aa13.82□□□□□ -0.2
MSH6-206ENST00000455383 KIAA1109Q2LD37 5005 aa13.82□□□□□ -0.2
MSH6-206ENST00000455383 IGLC7A0M8Q6 106 aa13.81□□□□□ -0.2
MSH6-206ENST00000455383 DEDDO75618 318 aa13.81□□□□□ -0.2
MSH6-206ENST00000455383 DEFA4P12838 97 aa13.81□□□□□ -0.2
MSH6-206ENST00000455383 PTBP1P26599 531 aaKnown RBP eCLIP13.81□□□□□ -0.2
MSH6-206ENST00000455383 TIMM50Q3ZCQ8 353 aa13.81□□□□□ -0.2
MSH6-206ENST00000455383 SSX9Q7RTT3 188 aa13.81□□□□□ -0.2
MSH6-206ENST00000455383 PRSS48Q7RTY5 328 aa13.81□□□□□ -0.2
MSH6-206ENST00000455383 NR2C2APQ86WQ0 139 aa13.81□□□□□ -0.2
MSH6-206ENST00000455383 TMEM217Q8N7C4 229 aa13.81□□□□□ -0.2
MSH6-206ENST00000455383 STPG3Q8N7X2 389 aa13.81□□□□□ -0.2
MSH6-206ENST00000455383 TMEM190Q8WZ59 177 aa13.81□□□□□ -0.2
MSH6-206ENST00000455383 SRSF8Q9BRL6 282 aaKnown RBP13.81□□□□□ -0.2
MSH6-206ENST00000455383 TAS2R8Q9NYW2 309 aa13.81□□□□□ -0.2
MSH6-206ENST00000455383 RAB3BP20337 219 aa13.8□□□□□ -0.2
MSH6-206ENST00000455383 MSMO1Q15800 293 aa13.8□□□□□ -0.2
MSH6-206ENST00000455383 PLET1Q6UQ28 207 aa13.8□□□□□ -0.2
MSH6-206ENST00000455383 PHLDA1Q8WV24 401 aaPredicted RBP13.8□□□□□ -0.2
MSH6-206ENST00000455383 NUDCD2Q8WVJ2 157 aa13.8□□□□□ -0.2
MSH6-206ENST00000455383 GPHA2Q96T91 129 aa13.8□□□□□ -0.2
MSH6-206ENST00000455383 ANXA10Q9UJ72 324 aa13.8□□□□□ -0.2
MSH6-206ENST00000455383 PCLOQ9Y6V0 5065 aa13.8□□□□□ -0.2
MSH6-206ENST00000455383 IGHV3-35A0A0C4DH35 117 aa13.79□□□□□ -0.2
MSH6-206ENST00000455383 RBFOX2O43251 390 aaKnown RBP eCLIP13.79□□□□□ -0.21e-6■□□□□ 8.9
MSH6-206ENST00000455383 TGOLN2O43493 480 aa13.79□□□□□ -0.2
MSH6-206ENST00000455383 SSX5O60225 188 aa13.79□□□□□ -0.2
MSH6-206ENST00000455383 S1PR2O95136 353 aa13.79□□□□□ -0.2
MSH6-206ENST00000455383 MYL9P24844 172 aa13.79□□□□□ -0.2
MSH6-206ENST00000455383 POU2AF1Q16633 256 aa13.79□□□□□ -0.2
MSH6-206ENST00000455383 VN1R17PQ8TDU5 208 aa13.79□□□□□ -0.2
MSH6-206ENST00000455383 AIFM2Q9BRQ8 373 aa13.79□□□□□ -0.2
MSH6-206ENST00000455383 CCDC90BQ9GZT6 254 aa13.79□□□□□ -0.2
MSH6-206ENST00000455383 MAP6D1Q9H9H5 199 aa13.79□□□□□ -0.2
MSH6-206ENST00000455383 TRDV1A0A1B0GX56 115 aa13.78□□□□□ -0.2
MSH6-206ENST00000455383 FGF2P09038 288 aa13.78□□□□□ -0.2
MSH6-206ENST00000455383 GALNT14Q96FL9 552 aa13.78□□□□□ -0.2
MSH6-206ENST00000455383 DAZ1Q9NQZ3 744 aaKnown RBP13.78□□□□□ -0.2
MSH6-206ENST00000455383 THYN1Q9P016 225 aa13.78□□□□□ -0.2
MSH6-206ENST00000455383 TRAV3A0A0B4J244 114 aa13.77□□□□□ -0.21
MSH6-206ENST00000455383 TMEM235A6NFC5 223 aa13.77□□□□□ -0.21
MSH6-206ENST00000455383 UPK2O00526 184 aa13.77□□□□□ -0.21
MSH6-206ENST00000455383 TBCEQ15813 527 aaPredicted RBP13.77□□□□□ -0.21
MSH6-206ENST00000455383 LAMTOR1Q6IAA8 161 aa13.77□□□□□ -0.21
MSH6-206ENST00000455383 ZNF773Q6PK81 442 aa13.77□□□□□ -0.21
MSH6-206ENST00000455383 ATP6V0BQ99437 205 aa13.77□□□□□ -0.21
MSH6-206ENST00000455383 HRASLSQ9HDD0 168 aa13.77□□□□□ -0.21
MSH6-206ENST00000455383 CCL28Q9NRJ3 127 aa13.77□□□□□ -0.21
MSH6-206ENST00000455383 NDUFB11Q9NX14 153 aa13.77□□□□□ -0.21
MSH6-206ENST00000455383 RPL35AP18077 110 aaKnown RBP13.76□□□□□ -0.21
MSH6-206ENST00000455383 AQP4P55087 323 aa13.76□□□□□ -0.21
MSH6-206ENST00000455383 TAS2R31P59538 309 aa13.76□□□□□ -0.21
MSH6-206ENST00000455383 ZNF367Q7RTV3 350 aa13.76□□□□□ -0.21
MSH6-206ENST00000455383 SPAG16Q8N0X2 631 aa13.76□□□□□ -0.21
MSH6-206ENST00000455383 ZBTB34Q8NCN2 500 aa13.76□□□□□ -0.21
MSH6-206ENST00000455383 OR4C46A6NHA9 309 aa13.75□□□□□ -0.21
MSH6-206ENST00000455383 K7EMT4 169 aa13.75□□□□□ -0.21
MSH6-206ENST00000455383 NDUFA4O00483 81 aa13.75□□□□□ -0.21
MSH6-206ENST00000455383 TNFSF12O43508 249 aa13.75□□□□□ -0.21
MSH6-206ENST00000455383 FCGR2BP31994 310 aaPredicted RBP13.75□□□□□ -0.21
MSH6-206ENST00000455383 GDPD1Q8N9F7 314 aa13.75□□□□□ -0.21
MSH6-206ENST00000455383 BSCL2Q96G97 398 aaPredicted RBP13.75□□□□□ -0.21
MSH6-206ENST00000455383 COMMD5Q9GZQ3 224 aa13.75□□□□□ -0.21
MSH6-206ENST00000455383 OR2T8A6NH00 312 aa13.74□□□□□ -0.21
MSH6-206ENST00000455383 F8W735 103 aaPredicted RBP13.74□□□□□ -0.21
MSH6-206ENST00000455383 SCGNO76038 276 aa13.74□□□□□ -0.21
MSH6-206ENST00000455383 HPRT1P00492 218 aa13.74□□□□□ -0.21
MSH6-206ENST00000455383 RPA2P15927 270 aa13.74□□□□□ -0.21
MSH6-206ENST00000455383 NQO2P16083 231 aa13.74□□□□□ -0.21
MSH6-206ENST00000455383 GNG2P59768 71 aa13.74□□□□□ -0.21
MSH6-206ENST00000455383 THOC7Q6I9Y2 204 aaKnown RBP13.74□□□□□ -0.21
MSH6-206ENST00000455383 SPSB3Q6PJ21 355 aa13.74□□□□□ -0.21
MSH6-206ENST00000455383 OR10W1Q8NGF6 305 aa13.74□□□□□ -0.21
MSH6-206ENST00000455383 OR13F1Q8NGS4 319 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms