RNA–Protein interactions for RNA: ENST00000453724.5

RPE-215, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5

Gene RPE, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-215	ENST00000453724	CFHR3	Q02985	330 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	TNXA	Q16473	311 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	BAK1	Q16611	211 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.89	□□□□□ -1.63
RPE-215	ENST00000453724	C19orf54	Q5BKX5	351 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	MZT2B	Q6NZ67	158 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	TMEM65	Q6PI78	240 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724		Q6ZS46	218 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	H2BFWT	Q7Z2G1	175 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	NRARP	Q7Z6K4	114 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	OR4F17	Q8NGA8	305 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	OR5B3	Q8NH48	314 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	SRSF12	Q8WXF0	261 aa	Known RBP	4.89	□□□□□ -1.63
RPE-215	ENST00000453724	RBPMS	Q93062	196 aa	Known RBP	4.89	□□□□□ -1.63
RPE-215	ENST00000453724	OR4F4	Q96R69	305 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	PHB2	Q99623	299 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.89	□□□□□ -1.63
RPE-215	ENST00000453724	COMMD5	Q9GZQ3	224 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	TMEM222	Q9H0R3	208 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.89	□□□□□ -1.63
RPE-215	ENST00000453724	TPSG1	Q9NRR2	321 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	TMEM140	Q9NV12	185 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	PRND	Q9UKY0	176 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	ZNF257	Q9Y2Q1	563 aa		4.89	□□□□□ -1.63
RPE-215	ENST00000453724	C15orf61	A6NNL5	157 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	UPK2	O00526	184 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	LYRM1	O43325	122 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	CDS2	O95674	445 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	KRAS	P01116	189 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	IGLV1-40	P01703	118 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	IL6R	P08887	468 aa	Predicted RBP	4.88	□□□□□ -1.63
RPE-215	ENST00000453724	OR5AC1	P0C628	307 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	HLA-G	P17693	338 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	PI3	P19957	117 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	PPIF	P30405	207 aa	Known RBP	4.88	□□□□□ -1.63
RPE-215	ENST00000453724	RPL27A	P46776	148 aa	Known RBP	4.88	□□□□□ -1.63
RPE-215	ENST00000453724	GNB1	P62873	340 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	ECSCR	Q19T08	205 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	ZFP69	Q49AA0	526 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	ZNF585B	Q52M93	769 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	UNQ5815/PRO19632	Q6UWF5	114 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	SSX9	Q7RTT3	188 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	ZNF429	Q86V71	674 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	OR1L6	Q8NGR2	347 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	OR1L8	Q8NGR8	309 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	RNASE11	Q8TAA1	199 aa	Known RBP	4.88	□□□□□ -1.63
RPE-215	ENST00000453724	GRPEL2	Q8TAA5	225 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.88	□□□□□ -1.63
RPE-215	ENST00000453724	ENKUR	Q8TC29	256 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	MYOZ3	Q8TDC0	251 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	C4orf3	Q8WVX3	66 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	LSM10	Q969L4	123 aa	Known RBP	4.88	□□□□□ -1.63
RPE-215	ENST00000453724	RRNAD1	Q96FB5	475 aa	Known RBP	4.88	□□□□□ -1.63
RPE-215	ENST00000453724	SEC22A	Q96IW7	307 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	NOL4L	Q96MY1	436 aa	Predicted RBP	4.88	□□□□□ -1.63
RPE-215	ENST00000453724	TP53RK	Q96S44	253 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	GPHA2	Q96T91	129 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	QTRT1	Q9BXR0	403 aa	Known RBP	4.88	□□□□□ -1.63
RPE-215	ENST00000453724	TMEM14B	Q9NUH8	114 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	VSIG4	Q9Y279	399 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724	NUBP2	Q9Y5Y2	271 aa		4.88	□□□□□ -1.63
RPE-215	ENST00000453724		A0A0B4J2A0	478 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724		A0A0G2JLM5	398 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	LINC00854	A0A1B0GVQ3	168 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724		A0A1W2PN81	502 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	TCRBV4S1A1T	A0A5B7	111 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	SH2D7	A6NKC9	451 aa	Predicted RBP	4.87	□□□□□ -1.63
RPE-215	ENST00000453724	FAM223B	A6NKX1	122 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	NPIPB5	A8MRT5	1133 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	FCN1	O00602	326 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	ARPC1B	O15143	372 aa	Known RBP	4.87	□□□□□ -1.63
RPE-215	ENST00000453724	OR9G9	P0C7N8	305 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724		P0C879	139 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	PF4V1	P10720	104 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	HIST1H1B	P16401	226 aa	Known RBP	4.87	□□□□□ -1.63
RPE-215	ENST00000453724	G6PC	P35575	357 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	CHRNA7	P36544	502 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	CDX1	P47902	265 aa	Predicted RBP	4.87	□□□□□ -1.63
RPE-215	ENST00000453724	NKX2-5	P52952	324 aa	Predicted RBP	4.87	□□□□□ -1.63
RPE-215	ENST00000453724	RAB25	P57735	213 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	RPL23A	P62750	156 aa	Known RBP	4.87	□□□□□ -1.63
RPE-215	ENST00000453724	SSBP2	P81877	361 aa	Predicted RBP	4.87	□□□□□ -1.63
RPE-215	ENST00000453724	RUNX1	Q01196	453 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	DEFA6	Q01524	100 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	IFITM2	Q01629	132 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	PJVK	Q0ZLH3	352 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	MRGPRG-AS1	Q2M3A8	158 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	KHDC1L	Q5JSQ8	128 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	PRR31	Q5SQ13	230 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	PLET1	Q6UQ28	207 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	TMED4	Q7Z7H5	227 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	ZNF329	Q86UD4	541 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	ZNF695	Q8IW36	515 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	FAM223A	Q8IWN6	122 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	VKORC1L1	Q8N0U8	176 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	LGI3	Q8N145	548 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	LRTM2	Q8N967	370 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	LFNG	Q8NES3	379 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	OR4A16	Q8NH70	328 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	GLYATL2	Q8WU03	294 aa		4.87	□□□□□ -1.63

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