RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TRAV1-1A0A0B4J248 108 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 C17orf112F2Z3M2 114 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 ENSAO43768 121 aaKnown RBP9.6□□□□□ -0.87
VTA1-203ENST00000452973 CA2P00918 260 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 APOA2P02652 100 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 NPY1RP25929 384 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 TAGLN2P37802 199 aaKnown RBP9.6□□□□□ -0.87
VTA1-203ENST00000452973 EFNB3Q15768 340 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 ZNF674Q2M3X9 581 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 ZNF672Q499Z4 452 aaPredicted RBP9.6□□□□□ -0.87
VTA1-203ENST00000452973 PDLIM3Q53GG5 364 aaPredicted RBP9.6□□□□□ -0.87
VTA1-203ENST00000452973 SP5Q6BEB4 398 aaPredicted RBP9.6□□□□□ -0.87
VTA1-203ENST00000452973 SLC24A4Q8NFF2 622 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 OR10W1Q8NGF6 305 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 OR52E5Q8NH55 327 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 NIPSNAP3BQ9BS92 247 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 PARD6GQ9BYG4 376 aaPredicted RBP9.6□□□□□ -0.87
VTA1-203ENST00000452973 TMEM14BQ9NUH8 114 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 TNFRSF13BO14836 293 aaPredicted RBP9.6□□□□□ -0.87
VTA1-203ENST00000452973 TREML4Q6UXN2 200 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 UNKLQ9H9P5 680 aaKnown RBP9.6□□□□□ -0.87
VTA1-203ENST00000452973 PLEKHA3Q9HB20 300 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 TIMM9Q9Y5J7 89 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 URGCP-MRPS24S4R325 110 aa9.6□□□□□ -0.87
VTA1-203ENST00000452973 COLCA2A8K830 154 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 SOX15O60248 233 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 MIC13Q5XKP0 118 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 ACTR3CQ9C0K3 210 aaPredicted RBP9.59□□□□□ -0.87
VTA1-203ENST00000452973 SAV1Q9H4B6 383 aaPredicted RBP9.59□□□□□ -0.87
VTA1-203ENST00000452973 SMDT1Q9H4I9 107 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 FOXA2Q9Y261 457 aaPredicted RBP9.59□□□□□ -0.87
VTA1-203ENST00000452973 DLK1P80370 383 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 AARDQ4LEZ3 155 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 ZNF833PQ6ZTB9 187 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 MOB3BQ86TA1 216 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 FLYWCH2Q96CP2 140 aaKnown RBP9.59□□□□□ -0.87
VTA1-203ENST00000452973 WDR83OSQ9Y284 106 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 hCG_1809904A0A1W2PP81 198 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 A0A1W2PR64 198 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 A0A1W2PRV1 198 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 H0YJW9 148 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 UPK2O00526 184 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 KBTBD11O94819 623 aa9.59□□□□□ -0.87
VTA1-203ENST00000452973 CTXND1A0A1B0GTU2 59 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 TEX50A0A1B0GTY4 177 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 PCP4L1A6NKN8 68 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 CYB5BO43169 146 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 IGHV1-8P0DP01 117 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 COX7A1P24310 79 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 CDC34P49427 236 aaPredicted RBP9.58□□□□□ -0.88
VTA1-203ENST00000452973 MLANAQ16655 118 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 VWC2Q2TAL6 325 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 FBXL19-AS1Q494R0 122 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 VAX2Q9UIW0 290 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 PRNDQ9UKY0 176 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 WNK2Q9Y3S1 2297 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 A0A1W2PPV4 95 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 OR2C1O95371 312 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 IFNA1P01562 189 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 MBP02144 154 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 UBE2G2P60604 165 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 ACOT6Q3I5F7 207 aaPredicted RBP9.58□□□□□ -0.88
VTA1-203ENST00000452973 TMEM30BQ3MIR4 351 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 TMEM155Q4W5P6 130 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 ARSJQ5FYB0 599 aaPredicted RBP9.58□□□□□ -0.88
VTA1-203ENST00000452973 C10orf55Q5SWW7 151 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 CENPVQ7Z7K6 275 aaPredicted RBP9.58□□□□□ -0.88
VTA1-203ENST00000452973 TGIF2LXQ8IUE1 241 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 RPUSD4Q96CM3 377 aaKnown RBP9.58□□□□□ -0.88
VTA1-203ENST00000452973 MGST2Q99735 147 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 COMMD5Q9GZQ3 224 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 KAAG1Q9UBP8 84 aa9.58□□□□□ -0.88
VTA1-203ENST00000452973 NAV3Q8IVL0 2385 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 KIAA0141Q14154 515 aaPredicted RBP9.57□□□□□ -0.88
VTA1-203ENST00000452973 RHEBQ15382 184 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 UNQ6494/PRO21346Q6UXR6 183 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 RBMS3Q6XE24 437 aaKnown RBP9.57□□□□□ -0.88
VTA1-203ENST00000452973 OR10A7Q8NGE5 316 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 HIST1H2BAQ96A08 127 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 RITA1Q96K30 269 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 NDUFA2O43678 99 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 PAGE4O60829 102 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 APELAP0DMC3 54 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 Q8N7P7 452 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 OR4F5Q8NH21 305 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 OR9G1Q8NH87 305 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 TVP23CQ96ET8 276 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 OR4F4Q96R69 305 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 PXMP4Q9Y6I8 212 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 ABCA1O95477 2261 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 E7EUB6 86 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 IGHV3-48P01763 117 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 SOD3P08294 240 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 PSMB3P49720 205 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 FAM90A2PQ658T7 463 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 NPVFQ9HCQ7 196 aa9.57□□□□□ -0.88
VTA1-203ENST00000452973 SVEP1Q4LDE5 3571 aa9.56□□□□□ -0.88
VTA1-203ENST00000452973 PRSS46E5RG02 174 aa9.56□□□□□ -0.88
VTA1-203ENST00000452973 DLL1O00548 723 aa9.56□□□□□ -0.88
VTA1-203ENST00000452973 SLC25A17O43808 307 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms