RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 COMMD9Q9P000 198 aa13.71□□□□□ -0.21
CTNS-204ENST00000452111 FBXL7Q9UJT9 491 aa13.71□□□□□ -0.21
CTNS-204ENST00000452111 HUWE1Q7Z6Z7 4374 aaKnown RBP13.71□□□□□ -0.22
CTNS-204ENST00000452111 CGB1A6NKQ9 187 aa13.7□□□□□ -0.22
CTNS-204ENST00000452111 BMPR1BO00238 502 aa13.7□□□□□ -0.22
CTNS-204ENST00000452111 GPR31O00270 319 aa13.7□□□□□ -0.22
CTNS-204ENST00000452111 IGLV1-51P01701 117 aa13.7□□□□□ -0.22
CTNS-204ENST00000452111 PSMB6P28072 239 aa13.7□□□□□ -0.22
CTNS-204ENST00000452111 ALDH3B2P48448 385 aa13.7□□□□□ -0.22
CTNS-204ENST00000452111 ERVK-16P61578 105 aa13.7□□□□□ -0.22
CTNS-204ENST00000452111 TATDN3Q17R31 274 aa13.7□□□□□ -0.22
CTNS-204ENST00000452111 PHLDA2Q53GA4 152 aa13.7□□□□□ -0.22
CTNS-204ENST00000452111 EXTL2Q9UBQ6 330 aa13.7□□□□□ -0.22
CTNS-204ENST00000452111 COL7A1Q02388 2944 aa13.7□□□□□ -0.22
CTNS-204ENST00000452111 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.69□□□□□ -0.22
CTNS-204ENST00000452111 DHFRP00374 187 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 IGHV3-23P01764 117 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 CRYGCP07315 174 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 CTRB1P17538 263 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 F2RP25116 425 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 OR2B8PP59922 312 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 CTRB2Q6GPI1 263 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 IL34Q6ZMJ4 242 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 FCAMRQ8WWV6 532 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 DGCR14Q96DF8 476 aaKnown RBP13.69□□□□□ -0.22
CTNS-204ENST00000452111 FANCD2OSQ96PS1 177 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 COMMD5Q9GZQ3 224 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 S4R3C0 116 aa13.69□□□□□ -0.22
CTNS-204ENST00000452111 SORL1Q92673 2214 aa13.68□□□□□ -0.22
CTNS-204ENST00000452111 MARCH11A6NNE9 402 aa13.68□□□□□ -0.22
CTNS-204ENST00000452111 PPP5D1E7EU14 171 aa13.68□□□□□ -0.22
CTNS-204ENST00000452111 M0QYG6 137 aa13.68□□□□□ -0.22
CTNS-204ENST00000452111 NDUFB8O95169 186 aa13.68□□□□□ -0.22
CTNS-204ENST00000452111 DEFA4P12838 97 aa13.68□□□□□ -0.22
CTNS-204ENST00000452111 LPAR6P43657 344 aa13.68□□□□□ -0.22
CTNS-204ENST00000452111 KLK11Q9UBX7 282 aa13.68□□□□□ -0.22
CTNS-204ENST00000452111 IGLC7A0M8Q6 106 aa13.67□□□□□ -0.22
CTNS-204ENST00000452111 KRASP01116 189 aa13.67□□□□□ -0.22
CTNS-204ENST00000452111 HLA-AP01891 365 aaKnown RBP13.67□□□□□ -0.22
CTNS-204ENST00000452111 CSN3P07498 182 aa13.67□□□□□ -0.22
CTNS-204ENST00000452111 NHLRC4P0CG21 123 aaPredicted RBP13.67□□□□□ -0.22
CTNS-204ENST00000452111 G6PCP35575 357 aa13.67□□□□□ -0.22
CTNS-204ENST00000452111 SPCS2Q15005 226 aa13.67□□□□□ -0.22
CTNS-204ENST00000452111 ZNF585BQ52M93 769 aa13.67□□□□□ -0.22
CTNS-204ENST00000452111 CLVS1Q8IUQ0 354 aaPredicted RBP13.67□□□□□ -0.22
CTNS-204ENST00000452111 OR52I2Q8NH67 350 aa13.67□□□□□ -0.22
CTNS-204ENST00000452111 QTRT1Q9BXR0 403 aaKnown RBP13.67□□□□□ -0.22
CTNS-204ENST00000452111 PEMTQ9UBM1 199 aa13.67□□□□□ -0.22
CTNS-204ENST00000452111 RGS5O15539 181 aa13.66□□□□□ -0.22
CTNS-204ENST00000452111 S100GP29377 79 aa13.66□□□□□ -0.22
CTNS-204ENST00000452111 LPCAT3Q6P1A2 487 aa13.66□□□□□ -0.22
CTNS-204ENST00000452111 TBC1D26Q86UD7 250 aa13.66□□□□□ -0.22
CTNS-204ENST00000452111 OR10W1Q8NGF6 305 aa13.66□□□□□ -0.22
CTNS-204ENST00000452111 CCDC140Q96MF4 163 aa13.66□□□□□ -0.22
CTNS-204ENST00000452111 NSG2Q9Y328 171 aa13.66□□□□□ -0.22
CTNS-204ENST00000452111 IGLV11-55A0A075B6I3 123 aa13.65□□□□□ -0.22
CTNS-204ENST00000452111 IFNA6P05013 189 aa13.65□□□□□ -0.22
CTNS-204ENST00000452111 HIST1H1BP16401 226 aaKnown RBP13.65□□□□□ -0.22
CTNS-204ENST00000452111 RNASE10Q5GAN6 216 aaKnown RBP13.65□□□□□ -0.22
CTNS-204ENST00000452111 FAM209BQ5JX69 171 aa13.65□□□□□ -0.22
CTNS-204ENST00000452111 CLEC19AQ6UXS0 136 aa13.65□□□□□ -0.22
CTNS-204ENST00000452111 LAX1Q8IWV1 398 aa13.65□□□□□ -0.22
CTNS-204ENST00000452111 SLC38A6Q8IZM9 456 aa13.65□□□□□ -0.22
CTNS-204ENST00000452111 EEF1AKMT3Q96AZ1 226 aa13.65□□□□□ -0.22
CTNS-204ENST00000452111 ABHD1Q96SE0 405 aa13.65□□□□□ -0.22
CTNS-204ENST00000452111 HINT2Q9BX68 163 aa13.65□□□□□ -0.22
CTNS-204ENST00000452111 MIXL1Q9H2W2 232 aa13.65□□□□□ -0.22
CTNS-204ENST00000452111 DMRT1Q9Y5R6 373 aa13.65□□□□□ -0.22
CTNS-204ENST00000452111 TEX50A0A1B0GTY4 177 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 MFSD2BA6NFX1 497 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 H0Y980 276 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 GGCTO75223 188 aaKnown RBP13.64□□□□□ -0.23
CTNS-204ENST00000452111 OR2C1O95371 312 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 CD3DP04234 171 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 FGF2P09038 288 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 FRMD6-AS1P0C7T7 363 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 TRAPPC2P0DI81 140 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 TRAPPC2BP0DI82 140 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 ARL3P36405 182 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 UCP3P55916 312 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 OR1L8Q8NGR8 309 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 SRSF8Q9BRL6 282 aaKnown RBP13.64□□□□□ -0.23
CTNS-204ENST00000452111 SIGLEC8Q9NYZ4 499 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 MTFP1Q9UDX5 166 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 U3KQK5 164 aa13.64□□□□□ -0.23
CTNS-204ENST00000452111 CTDSP2O14595 271 aa13.63□□□□□ -0.23
CTNS-204ENST00000452111 SNAPC5O75971 98 aa13.63□□□□□ -0.23
CTNS-204ENST00000452111 OR13C7P0DN81 318 aa13.63□□□□□ -0.23
CTNS-204ENST00000452111 PGAM2P15259 253 aa13.63□□□□□ -0.23
CTNS-204ENST00000452111 KLK9Q2XQG4 91 aa13.63□□□□□ -0.23
CTNS-204ENST00000452111 SBSPONQ8IVN8 264 aa13.63□□□□□ -0.23
CTNS-204ENST00000452111 RAB2BQ8WUD1 216 aa13.63□□□□□ -0.23
CTNS-204ENST00000452111 ZC4H2Q9NQZ6 224 aa13.63□□□□□ -0.23
CTNS-204ENST00000452111 KLK9Q9UKQ9 250 aa13.63□□□□□ -0.23
CTNS-204ENST00000452111 OR51B2Q9Y5P1 312 aa13.63□□□□□ -0.23
CTNS-204ENST00000452111 PI3P19957 117 aa13.62□□□□□ -0.23
CTNS-204ENST00000452111 EDN2P20800 178 aa13.62□□□□□ -0.23
CTNS-204ENST00000452111 WT1-ASQ06250 92 aa13.62□□□□□ -0.23
CTNS-204ENST00000452111 THOC7Q6I9Y2 204 aaKnown RBP13.62□□□□□ -0.23
CTNS-204ENST00000452111 LCN12Q6JVE5 192 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms