RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 OR2A7Q96R45 310 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 MDFIQ99750 246 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 HSPB9Q9BQS6 159 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 COA4Q9NYJ1 87 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 LINC01548A6NM66 108 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 FCN1O00602 326 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 SNAPC5O75971 98 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 SIX6O95475 246 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 SAA1P0DJI8 122 aaPredicted RBP10.31□□□□□ -0.76
VPS33A-202ENST00000451053 UBE2KP61086 200 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 SSX9Q7RTT3 188 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 TCTE3Q8IZS6 198 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 OR4A5Q8NH83 315 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 OR2T6Q8NHC8 308 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 CLCC1Q96S66 551 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 TMEM140Q9NV12 185 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 BET1LQ9NYM9 111 aa10.31□□□□□ -0.76
VPS33A-202ENST00000451053 IGHG2P01859 326 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 HLA-DRB1P01911 266 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 FGF2P09038 288 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 P0C879 139 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 PET100P0DJ07 73 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 FGL1Q08830 312 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 PJVKQ0ZLH3 352 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 FOXL1Q12952 345 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 MRGPRG-AS1Q2M3A8 158 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 ARSJQ5FYB0 599 aaPredicted RBP10.3□□□□□ -0.76
VPS33A-202ENST00000451053 OR4A47Q6IF82 309 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 SLC35E3Q7Z769 313 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 ZBTB8BQ8NAP8 495 aaPredicted RBP10.3□□□□□ -0.76
VPS33A-202ENST00000451053 OR4A16Q8NH70 328 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 OR1S1Q8NH92 325 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 PPP1R14BQ96C90 147 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 GPR146Q96CH1 333 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 OR10C1Q96KK4 312 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 NEURL2Q9BR09 285 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 RANGRFQ9HD47 186 aaPredicted RBP10.3□□□□□ -0.76
VPS33A-202ENST00000451053 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.3□□□□□ -0.76
VPS33A-202ENST00000451053 SERTAD4Q9NUC0 356 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 GSKIPQ9P0R6 139 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 CACNG5Q9UF02 275 aa10.3□□□□□ -0.76
VPS33A-202ENST00000451053 IGHV7-81A0A0B4J1V7 117 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 CLPSL1A2RUU4 121 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 MPTX1A8MV57 137 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 FAM90A26D6RGX4 464 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 RBMXL2O75526 392 aaKnown RBP10.29□□□□□ -0.76
VPS33A-202ENST00000451053 CA2P00918 260 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 VDAC2P45880 294 aaPredicted RBP10.29□□□□□ -0.76
VPS33A-202ENST00000451053 NDPQ00604 133 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 KRTAP21-3Q3LHN1 58 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 AWAT1Q58HT5 328 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 PPP1R27Q86WC6 154 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 FOXRED2Q8IWF2 684 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 PUSL1Q8N0Z8 303 aaKnown RBP10.29□□□□□ -0.76
VPS33A-202ENST00000451053 TEX45Q8NA69 505 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 OR2T35Q8NGX2 323 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 ST6GAL2Q96JF0 529 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 FKBP11Q9NYL4 201 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 RNF114Q9Y508 228 aa10.29□□□□□ -0.76
VPS33A-202ENST00000451053 A0A0G2JRQ6 117 aa10.28□□□□□ -0.76
VPS33A-202ENST00000451053 ST8SIA3O43173 380 aa10.28□□□□□ -0.76
VPS33A-202ENST00000451053 KBTBD11O94819 623 aa10.28□□□□□ -0.76
VPS33A-202ENST00000451053 CX3CL1P78423 397 aa10.28□□□□□ -0.76
VPS33A-202ENST00000451053 SSBP2P81877 361 aaPredicted RBP10.28□□□□□ -0.76
VPS33A-202ENST00000451053 PRSS8Q16651 343 aa10.28□□□□□ -0.76
VPS33A-202ENST00000451053 OR4D5Q8NGN0 318 aa10.28□□□□□ -0.76
VPS33A-202ENST00000451053 TMEM167AQ8TBQ9 72 aa10.28□□□□□ -0.76
VPS33A-202ENST00000451053 NOL4LQ96MY1 436 aaPredicted RBP10.28□□□□□ -0.76
VPS33A-202ENST00000451053 FYTTD1Q96QD9 318 aaKnown RBP10.28□□□□□ -0.76
VPS33A-202ENST00000451053 LINC00527Q9UJ94 153 aa10.28□□□□□ -0.76
VPS33A-202ENST00000451053 PRNDQ9UKY0 176 aa10.28□□□□□ -0.76
VPS33A-202ENST00000451053 FBN1P35555 2871 aaKnown RBP10.27□□□□□ -0.77
VPS33A-202ENST00000451053 TRAV3A0A0B4J244 114 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 A0A1B0GUS0 222 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 C15orf61A6NNL5 157 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 HAX1O00165 279 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 WRBO00258 174 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 UPK2O00526 184 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 ATP6V0E1O15342 81 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 KCNAB3O43448 404 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 PITX3O75364 302 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 MED6O75586 246 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 RLN2P04090 185 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 IL6RP08887 468 aaPredicted RBP10.27□□□□□ -0.77
VPS33A-202ENST00000451053 PSMB6P28072 239 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 NKX2-1P43699 371 aaPredicted RBP10.27□□□□□ -0.77
VPS33A-202ENST00000451053 COMPP49747 757 aaPredicted RBP10.27□□□□□ -0.77
VPS33A-202ENST00000451053 PROK1P58294 105 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 GNB1P62873 340 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 AARDQ4LEZ3 155 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 ZNF429Q86V71 674 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 MMD2Q8IY49 270 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 KLHDC1Q8N7A1 406 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 PPP1R1CQ8WVI7 109 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 WNT10AQ9GZT5 417 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 ZNF430Q9H8G1 570 aaPredicted RBP10.27□□□□□ -0.77
VPS33A-202ENST00000451053 PARP11Q9NR21 331 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 FOXA2Q9Y261 457 aaPredicted RBP10.27□□□□□ -0.77
VPS33A-202ENST00000451053 FBXO7Q9Y3I1 522 aa10.27□□□□□ -0.77
VPS33A-202ENST00000451053 LY86O95711 162 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms