RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 SCPEP1Q9HB40 452 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 HRASLSQ9HDD0 168 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 COMMD9Q9P000 198 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 FBXL7Q9UJT9 491 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 KMT2CQ8NEZ4 4911 aaKnown RBP14.75□□□□□ -0.05
USP40-207ENST00000450940 TRAV3A0A0B4J244 114 aa14.74□□□□□ -0.05
USP40-207ENST00000450940 SMIM31A0A1B0GVY4 71 aa14.74□□□□□ -0.05
USP40-207ENST00000450940 DHFRP00374 187 aa14.74□□□□□ -0.05
USP40-207ENST00000450940 SMIM18P0DKX4 95 aa14.74□□□□□ -0.05
USP40-207ENST00000450940 HIST1H1BP16401 226 aaKnown RBP14.74□□□□□ -0.05
USP40-207ENST00000450940 AADACL3Q5VUY0 350 aa14.74□□□□□ -0.05
USP40-207ENST00000450940 OR6F1Q8NGZ6 308 aa14.74□□□□□ -0.05
USP40-207ENST00000450940 SRSF8Q9BRL6 282 aaKnown RBP14.74□□□□□ -0.05
USP40-207ENST00000450940 PEMTQ9UBM1 199 aa14.74□□□□□ -0.05
USP40-207ENST00000450940 S1PR2O95136 353 aa14.73□□□□□ -0.05
USP40-207ENST00000450940 NDUFB8O95169 186 aa14.73□□□□□ -0.05
USP40-207ENST00000450940 ELK1P19419 428 aa14.73□□□□□ -0.05
USP40-207ENST00000450940 F2RP25116 425 aa14.73□□□□□ -0.05
USP40-207ENST00000450940 RORCP51449 518 aa14.73□□□□□ -0.05
USP40-207ENST00000450940 CTF1Q16619 201 aa14.73□□□□□ -0.05
USP40-207ENST00000450940 ADAMTSL5Q6ZMM2 481 aa14.73□□□□□ -0.05
USP40-207ENST00000450940 TMEM140Q9NV12 185 aa14.73□□□□□ -0.05
USP40-207ENST00000450940 C19orf73Q9NVV2 129 aa14.73□□□□□ -0.05
USP40-207ENST00000450940 NBEAL2Q6ZNJ1 2754 aa14.73□□□□□ -0.05
USP40-207ENST00000450940 IGLV11-55A0A075B6I3 123 aa14.72□□□□□ -0.05
USP40-207ENST00000450940 IGLC7A0M8Q6 106 aa14.72□□□□□ -0.05
USP40-207ENST00000450940 GABARAPO95166 117 aa14.72□□□□□ -0.05
USP40-207ENST00000450940 HRH1P35367 487 aa14.72□□□□□ -0.05
USP40-207ENST00000450940 CMTM1Q8IZ96 169 aa14.72□□□□□ -0.05
USP40-207ENST00000450940 Q8N402 240 aa14.72□□□□□ -0.05
USP40-207ENST00000450940 OR2K2Q8NGT1 345 aa14.72□□□□□ -0.05
USP40-207ENST00000450940 DGCR14Q96DF8 476 aaKnown RBP14.72□□□□□ -0.05
USP40-207ENST00000450940 CCDC140Q96MF4 163 aa14.72□□□□□ -0.05
USP40-207ENST00000450940 FXYD6Q9H0Q3 95 aa14.72□□□□□ -0.05
USP40-207ENST00000450940 PPP5D1E7EU14 171 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 LGALS9O00182 355 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 GPR31O00270 319 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 HPGDSO60760 199 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 GGCTO75223 188 aaKnown RBP14.71□□□□□ -0.05
USP40-207ENST00000450940 RLN1P04808 185 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 IGHV4-30-4P0DP06 118 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 HLA-DMAP28067 261 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 ZNF585BQ52M93 769 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 LCN12Q6JVE5 192 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 GPHB5Q86YW7 130 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 DMBX1Q8NFW5 382 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 COMMD5Q9GZQ3 224 aa14.71□□□□□ -0.05
USP40-207ENST00000450940 NAA50Q9GZZ1 169 aaKnown RBP14.71□□□□□ -0.05
USP40-207ENST00000450940 FAM212BQ9NTI7 297 aaPredicted RBP14.71□□□□□ -0.05
USP40-207ENST00000450940 MARCH11A6NNE9 402 aa14.7□□□□□ -0.06
USP40-207ENST00000450940 REG1AP05451 166 aa14.7□□□□□ -0.06
USP40-207ENST00000450940 RCVRNP35243 200 aa14.7□□□□□ -0.06
USP40-207ENST00000450940 THOC7Q6I9Y2 204 aaKnown RBP14.7□□□□□ -0.06
USP40-207ENST00000450940 LPCAT3Q6P1A2 487 aa14.7□□□□□ -0.06
USP40-207ENST00000450940 FCAMRQ8WWV6 532 aa14.7□□□□□ -0.06
USP40-207ENST00000450940 QTRT1Q9BXR0 403 aaKnown RBP14.7□□□□□ -0.06
USP40-207ENST00000450940 TEX50A0A1B0GTY4 177 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 IZUMO1RA6ND01 250 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 TPPPO94811 219 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 OR2C1O95371 312 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 LPAR6P43657 344 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 UCP3P55916 312 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 MZT2AQ6P582 158 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 HSD17B13Q7Z5P4 300 aaPredicted RBP14.69□□□□□ -0.06
USP40-207ENST00000450940 SNX29P2Q8IUI4 249 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 SGPP2Q8IWX5 399 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 EEF1AKMT3Q96AZ1 226 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 CXorf58Q96LI9 332 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 RCHY1Q96PM5 261 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 DNAH7Q8WXX0 4024 aa14.69□□□□□ -0.06
USP40-207ENST00000450940 TRBV7-1A0A0A6YYK4 115 aa14.68□□□□□ -0.06
USP40-207ENST00000450940 HLA-AP01891 365 aaKnown RBP14.68□□□□□ -0.06
USP40-207ENST00000450940 DEFA4P12838 97 aa14.68□□□□□ -0.06
USP40-207ENST00000450940 ZNF182P17025 639 aaPredicted RBP14.68□□□□□ -0.06
USP40-207ENST00000450940 ARL3P36405 182 aa14.68□□□□□ -0.06
USP40-207ENST00000450940 ERVK-16P61578 105 aa14.68□□□□□ -0.06
USP40-207ENST00000450940 TSPAN5P62079 268 aa14.68□□□□□ -0.06
USP40-207ENST00000450940 CLEC19AQ6UXS0 136 aa14.68□□□□□ -0.06
USP40-207ENST00000450940 AP3S1Q92572 193 aa14.68□□□□□ -0.06
USP40-207ENST00000450940 TM2D3Q9BRN9 247 aa14.68□□□□□ -0.06
USP40-207ENST00000450940 NDUFA4L2Q9NRX3 87 aa14.68□□□□□ -0.06
USP40-207ENST00000450940 C2orf70A6NJV1 201 aa14.67□□□□□ -0.06
USP40-207ENST00000450940 IGHV3-23P01764 117 aa14.67□□□□□ -0.06
USP40-207ENST00000450940 TRAPPC2P0DI81 140 aa14.67□□□□□ -0.06
USP40-207ENST00000450940 TRAPPC2BP0DI82 140 aa14.67□□□□□ -0.06
USP40-207ENST00000450940 DEFB114Q30KQ6 69 aa14.67□□□□□ -0.06
USP40-207ENST00000450940 LAX1Q8IWV1 398 aa14.67□□□□□ -0.06
USP40-207ENST00000450940 OR10W1Q8NGF6 305 aa14.67□□□□□ -0.06
USP40-207ENST00000450940 OR1L8Q8NGR8 309 aa14.67□□□□□ -0.06
USP40-207ENST00000450940 MFSD2BA6NFX1 497 aa14.66□□□□□ -0.06
USP40-207ENST00000450940 ZNF785A8K8V0 405 aa14.66□□□□□ -0.06
USP40-207ENST00000450940 KRASP01116 189 aa14.66□□□□□ -0.06
USP40-207ENST00000450940 SERPINE2P07093 398 aa14.66□□□□□ -0.06
USP40-207ENST00000450940 FOLR2P14207 255 aa14.66□□□□□ -0.06
USP40-207ENST00000450940 RPA2P15927 270 aa14.66□□□□□ -0.06
USP40-207ENST00000450940 PTBP1P26599 531 aaKnown RBP eCLIP14.66□□□□□ -0.062e-7■■■■□ 23.9
USP40-207ENST00000450940 ALDH3B2P48448 385 aa14.66□□□□□ -0.06
USP40-207ENST00000450940 WT1-ASQ06250 92 aa14.66□□□□□ -0.06
USP40-207ENST00000450940 CD300EQ496F6 205 aaPredicted RBP14.66□□□□□ -0.06
USP40-207ENST00000450940 GPR107Q5VW38 600 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms