RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TNFSF12O43508 249 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 RBMXL2O75526 392 aaKnown RBP12.21□□□□□ -0.45
SGCE-208ENST00000450385 PGLYRP1O75594 196 aaPredicted RBP12.21□□□□□ -0.45
SGCE-208ENST00000450385 PTHLHP12272 177 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 DEFA4P12838 97 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 TGFBR1P36897 503 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 ERVK-16P61578 105 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 FAM106AQ4KMX7 169 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 AADACL3Q5VUY0 350 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 GTSCR1Q86UQ5 136 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 TMEM17Q86X19 198 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 LYSMD2Q8IV50 215 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 Q8N1Y9 231 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 DMBX1Q8NFW5 382 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 EEF1AKMT3Q96AZ1 226 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 FANCD2OSQ96PS1 177 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 TECRQ9NZ01 308 aaKnown RBP12.21□□□□□ -0.45
SGCE-208ENST00000450385 COMMD3Q9UBI1 195 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 STAB2Q8WWQ8 2551 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 E7EUB6 86 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 C3orf84H3BNL1 204 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 OR2J3O76001 311 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 TRBV12-3P01733 135 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 FRMD6-AS1P0C7T7 363 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 RCVRNP35243 200 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 UCP3P55916 312 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 OR2B8PP59922 312 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 C10orf55Q5SWW7 151 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 SSX9Q7RTT3 188 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 OR1L6Q8NGR2 347 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 DGCR14Q96DF8 476 aaKnown RBP12.2□□□□□ -0.46
SGCE-208ENST00000450385 QTRT1Q9BXR0 403 aaKnown RBP12.2□□□□□ -0.46
SGCE-208ENST00000450385 C19orf73Q9NVV2 129 aa12.2□□□□□ -0.46
SGCE-208ENST00000450385 MEIS3P1A6NDR6 274 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 MARCH11A6NNE9 402 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 PMP2P02689 132 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 PRH1P02810 166 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 HRH1P35367 487 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 VBP1P61758 197 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 TSPAN5P62079 268 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 SBSPONQ8IVN8 264 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 OR1L8Q8NGR8 309 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 OR51H1Q8NH63 302 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 GPHA2Q96T91 129 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 TSC22D3Q99576 134 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 TMEM140Q9NV12 185 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 DMRT1Q9Y5R6 373 aa12.19□□□□□ -0.46
SGCE-208ENST00000450385 IGLV11-55A0A075B6I3 123 aa12.18□□□□□ -0.46
SGCE-208ENST00000450385 A0A1B0GW64 132 aa12.18□□□□□ -0.46
SGCE-208ENST00000450385 SNAPC5O75971 98 aa12.18□□□□□ -0.46
SGCE-208ENST00000450385 EIF4EP06730 217 aaKnown RBP12.18□□□□□ -0.46
SGCE-208ENST00000450385 TRAPPC2P0DI81 140 aa12.18□□□□□ -0.46
SGCE-208ENST00000450385 TRAPPC2BP0DI82 140 aa12.18□□□□□ -0.46
SGCE-208ENST00000450385 IGHV4-30-4P0DP06 118 aa12.18□□□□□ -0.46
SGCE-208ENST00000450385 ZNF182P17025 639 aaPredicted RBP12.18□□□□□ -0.46
SGCE-208ENST00000450385 TBPP20226 339 aa12.18□□□□□ -0.46
SGCE-208ENST00000450385 PTBP1P26599 531 aaKnown RBP eCLIP12.18□□□□□ -0.461e-6■■■□□ 14.7
SGCE-208ENST00000450385 NCS1P62166 190 aa12.18□□□□□ -0.46
SGCE-208ENST00000450385 VN1R17PQ8TDU5 208 aa12.18□□□□□ -0.46
SGCE-208ENST00000450385 ASCL2Q99929 193 aa12.18□□□□□ -0.46
SGCE-208ENST00000450385 THAP7Q9BT49 309 aaPredicted RBP12.18□□□□□ -0.46
SGCE-208ENST00000450385 PRNDQ9UKY0 176 aa12.18□□□□□ -0.46
SGCE-208ENST00000450385 IGLC7A0M8Q6 106 aa12.17□□□□□ -0.46
SGCE-208ENST00000450385 GABARAPO95166 117 aa12.17□□□□□ -0.46
SGCE-208ENST00000450385 AREGP15514 252 aa12.17□□□□□ -0.46
SGCE-208ENST00000450385 SLC38A6Q8IZM9 456 aa12.17□□□□□ -0.46
SGCE-208ENST00000450385 OR5B3Q8NH48 314 aa12.17□□□□□ -0.46
SGCE-208ENST00000450385 MARC2Q969Z3 335 aa12.17□□□□□ -0.46
SGCE-208ENST00000450385 ZNF486Q96H40 463 aaPredicted RBP12.17□□□□□ -0.46
SGCE-208ENST00000450385 TM2D3Q9BRN9 247 aa12.17□□□□□ -0.46
SGCE-208ENST00000450385 PALMDQ9NP74 551 aa12.17□□□□□ -0.46
SGCE-208ENST00000450385 NDUFA4L2Q9NRX3 87 aa12.17□□□□□ -0.46
SGCE-208ENST00000450385 DNAH7Q8WXX0 4024 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 CGB1A6NKQ9 187 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 S1PR2O95136 353 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 NDUFB8O95169 186 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 RLN1P04808 185 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 FCER2P06734 321 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 SERPINE2P07093 398 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 RPA2P15927 270 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 ELK1P19419 428 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 HLA-DMAP28067 261 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 ARL3P36405 182 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 ELLP55199 621 aaPredicted RBP12.16□□□□□ -0.46
SGCE-208ENST00000450385 CTF1Q16619 201 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 DEFB114Q30KQ6 69 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 GDPD1Q8N9F7 314 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 TMEM56Q96MV1 263 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 RCHY1Q96PM5 261 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 ZC4H2Q9NQZ6 224 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 SLC2A8Q9NY64 477 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 RABL2AQ9UBK7 228 aaPredicted RBP12.16□□□□□ -0.46
SGCE-208ENST00000450385 RABL2BQ9UNT1 228 aa12.16□□□□□ -0.46
SGCE-208ENST00000450385 HUWE1Q7Z6Z7 4374 aaKnown RBP12.15□□□□□ -0.46
SGCE-208ENST00000450385 TEX50A0A1B0GTY4 177 aa12.15□□□□□ -0.46
SGCE-208ENST00000450385 C2orf70A6NJV1 201 aa12.15□□□□□ -0.46
SGCE-208ENST00000450385 A8MWP6 167 aa12.15□□□□□ -0.46
SGCE-208ENST00000450385 IFNA6P05013 189 aa12.15□□□□□ -0.46
SGCE-208ENST00000450385 CLEC3BP05452 202 aa12.15□□□□□ -0.46
SGCE-208ENST00000450385 FOLR2P14207 255 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms