RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 TBR1Q16650 682 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 ZNF837Q96EG3 531 aaPredicted RBP8.6□□□□□ -1.03
SCN10A-201ENST00000449082 GGACTQ9BVM4 153 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 NPFFR1Q9GZQ6 430 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 C21orf62Q9NYP8 219 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.6□□□□□ -1.03
SCN10A-201ENST00000449082 FOXI3A8MTJ6 420 aaPredicted RBP8.6□□□□□ -1.03
SCN10A-201ENST00000449082 TCF24Q7RTU0 167 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 DPH3Q96FX2 82 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 PQLC2LA1A4F0 135 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 RND3P61587 244 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 CD69Q07108 199 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 ZNF660Q6AZW8 331 aaPredicted RBP8.6□□□□□ -1.03
SCN10A-201ENST00000449082 RAB37Q96AX2 223 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 TRAF4Q9BUZ4 470 aaPredicted RBP8.6□□□□□ -1.03
SCN10A-201ENST00000449082 PLSCR2Q9NRY7 297 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 DEPPQ9NTK1 212 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 SPRR3Q9UBC9 169 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 PEMTQ9UBM1 199 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 NPFFO15130 113 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 GCHFRP30047 84 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 PRSS8Q16651 343 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 FAM74A4Q5TZK3 123 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 LHFPL5Q8TAF8 219 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 PIKFYVEQ9Y2I7 2098 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 TRIOBPQ9H2D6 2365 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 M0QZK8 103 aa8.6□□□□□ -1.03
SCN10A-201ENST00000449082 PSMG3Q9BT73 122 aaPredicted RBP8.6□□□□□ -1.03
SCN10A-201ENST00000449082 MRPL20Q9BYC9 149 aaKnown RBP8.6□□□□□ -1.03
SCN10A-201ENST00000449082 FOXA2Q9Y261 457 aaPredicted RBP8.6□□□□□ -1.03
SCN10A-201ENST00000449082 A0A0G2JK05 382 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 A0A0G2JMZ2 1700 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 LRRC37A2A6NM11 1700 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 IGHV3OR16-13A0A075B7E8 117 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 IGHV3-74A0A0B4J1X5 117 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 IL6RP08887 468 aaPredicted RBP8.59□□□□□ -1.03
SCN10A-201ENST00000449082 COLCA1Q6ZS62 124 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 TRAV20A0A0B4J274 112 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 TMEM238LA0A1B0GVL6 79 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 A6NJY4 79 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 CEACAM4O75871 244 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 VDAC2P45880 294 aaPredicted RBP8.59□□□□□ -1.03
SCN10A-201ENST00000449082 ITLN2Q8WWU7 325 aaPredicted RBP8.59□□□□□ -1.03
SCN10A-201ENST00000449082 HIST1H2BAQ96A08 127 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 KIR2DL4Q99706 377 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 COL25A1Q9BXS0 654 aaPredicted RBP8.59□□□□□ -1.03
SCN10A-201ENST00000449082 OTOFQ9HC10 1997 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 GGCTO75223 188 aaKnown RBP8.59□□□□□ -1.03
SCN10A-201ENST00000449082 ADIPOQQ15848 244 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 LBHQ53QV2 105 aaPredicted RBP8.59□□□□□ -1.03
SCN10A-201ENST00000449082 COPS9Q8WXC6 57 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 SH3BGRL3Q9H299 93 aa8.59□□□□□ -1.03
SCN10A-201ENST00000449082 C17orf98A8MV24 154 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 GPR183P32249 361 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 DSCR9P59020 149 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 ICAM4Q14773 271 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 PRSS22Q9GZN4 317 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 ABCA7Q8IZY2 2146 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 H3BVH4 76 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 KLK2P20151 261 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 WBP1Q96G27 269 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 MRPL13Q9BYD1 178 aaKnown RBP8.58□□□□□ -1.04
SCN10A-201ENST00000449082 METRNQ9UJH8 293 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 IGHV3-66A0A0C4DH42 116 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 DANCRP0C864 163 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 CA7P43166 264 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 SAMD13Q5VXD3 122 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 CLEC19AQ6UXS0 136 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 RNASEH2CQ8TDP1 164 aaKnown RBP8.58□□□□□ -1.04
SCN10A-201ENST00000449082 MRPL18Q9H0U6 180 aaKnown RBP8.58□□□□□ -1.04
SCN10A-201ENST00000449082 PAM16Q9Y3D7 125 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 CBY1Q9Y3M2 126 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 A0A087X0M5 115 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 A0A1B0GX30 115 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 TMEM262E9PQX1 116 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 F12P00748 615 aaPredicted RBP8.58□□□□□ -1.04
SCN10A-201ENST00000449082 PAPPA-AS1Q5QFB9 102 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 TEX45Q8NA69 505 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 IGHV3-49A0A0A0MS15 119 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 PROB1E7EW31 1015 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 NBR2O15453 112 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 IL18BPO95998 194 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 NMBP08949 121 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 TIMP3P35625 211 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 H2BFSP57053 126 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 CIRBPQ14011 172 aaKnown RBP8.58□□□□□ -1.04
SCN10A-201ENST00000449082 SMIM12Q96EX1 92 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 SGK494Q96LW2 274 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 NEU1Q99519 415 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 S4R3C0 116 aa8.58□□□□□ -1.04
SCN10A-201ENST00000449082 IGHV1-18A0A0C4DH31 117 aa8.57□□□□□ -1.04
SCN10A-201ENST00000449082 PINLYPA6NC86 204 aa8.57□□□□□ -1.04
SCN10A-201ENST00000449082 H7C1H1 209 aa8.57□□□□□ -1.04
SCN10A-201ENST00000449082 RRHO14718 337 aa8.57□□□□□ -1.04
SCN10A-201ENST00000449082 COX6CP09669 75 aa8.57□□□□□ -1.04
SCN10A-201ENST00000449082 AGAP20933 346 aa8.57□□□□□ -1.04
SCN10A-201ENST00000449082 MDKP21741 143 aaPredicted RBP8.57□□□□□ -1.04
SCN10A-201ENST00000449082 MBNL2Q5VZF2 373 aaKnown RBP8.57□□□□□ -1.04
SCN10A-201ENST00000449082 A0A1B0GTI1 187 aa8.57□□□□□ -1.04
SCN10A-201ENST00000449082 TBX6O95947 436 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms