RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 PRR20AP86496 221 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 APRG1Q8IVJ8 170 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 MFSD4AQ8N468 514 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 HSD17B10Q99714 261 aaKnown RBP13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 C20orf24Q9BUV8 137 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 MFFQ9GZY8 342 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 MAP6D1Q9H9H5 199 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 THYN1Q9P016 225 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 ELF5Q9UKW6 265 aaPredicted RBP13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 KMT2AQ03164 3969 aa13.31□□□□□ -0.28
CHCHD3-203ENST00000448878 METTL21EPA6NDL7 271 aa13.3□□□□□ -0.28
CHCHD3-203ENST00000448878 OR4C46A6NHA9 309 aa13.3□□□□□ -0.28
CHCHD3-203ENST00000448878 S1PR2O95136 353 aa13.3□□□□□ -0.28
CHCHD3-203ENST00000448878 HLA-DQB1P01920 261 aa13.3□□□□□ -0.28
CHCHD3-203ENST00000448878 HLA-GP17693 338 aa13.3□□□□□ -0.28
CHCHD3-203ENST00000448878 ODF3L2Q3SX64 289 aa13.3□□□□□ -0.28
CHCHD3-203ENST00000448878 ZNF502Q8TBZ5 544 aa13.3□□□□□ -0.28
CHCHD3-203ENST00000448878 GPHA2Q96T91 129 aa13.3□□□□□ -0.28
CHCHD3-203ENST00000448878 ATG5Q9H1Y0 275 aa13.3□□□□□ -0.28
CHCHD3-203ENST00000448878 IGHV3OR16-8A0A075B7F1 116 aa13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 IGKV1D-13A0A0B4J2D9 117 aa13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 OR2T8A6NH00 312 aa13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 TGOLN2O43493 480 aa13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 ZNF207O43670 478 aaKnown RBP13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 CTXN2P0C2S0 81 aa13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 IGKV1-13P0DP09 117 aa13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 PSMA1P25786 263 aaKnown RBP13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 FABP5Q01469 135 aa13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 Q6ZS49 121 aa13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 CD300LFQ8TDQ1 290 aa13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 C2CD4CQ8TF44 421 aa13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 CSTL1Q9H114 145 aa13.29□□□□□ -0.28
CHCHD3-203ENST00000448878 MPTX1A8MV57 137 aa13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 PDCD5O14737 125 aa13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 TNFSF12O43508 249 aa13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 IGLV2-14P01704 120 aa13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 CTSDP07339 412 aaPredicted RBP13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 TFPI2P48307 235 aa13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 OR10A3P58181 314 aa13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 CDNFQ49AH0 187 aa13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 TMEM190Q8WZ59 177 aa13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 ZNF436Q9C0F3 470 aaPredicted RBP13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 CCDC90BQ9GZT6 254 aa13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 DAZ1Q9NQZ3 744 aaKnown RBP13.28□□□□□ -0.28
CHCHD3-203ENST00000448878 CGB1A6NKQ9 187 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 IGLL5B9A064 214 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 DEFB4AO15263 64 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 CYB5BO43169 146 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 RAB6AP20340 208 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 DTYMKP23919 212 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 PTBP1P26599 531 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■■■■□ 25.8
CHCHD3-203ENST00000448878 ZNF124Q15973 351 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 SSX1Q16384 188 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 SLC25A24Q6NUK1 477 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 OR11H2Q8NH07 326 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 AIFM2Q9BRQ8 373 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 COMMD5Q9GZQ3 224 aa13.27□□□□□ -0.29
CHCHD3-203ENST00000448878 IGKV3-7A0A075B6H7 116 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 IGHV3-21A0A0B4J1V1 117 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 XRCC3O43542 346 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 BRWD1-AS2P59051 145 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 OR2B8PP59922 312 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 ARL6IP1Q15041 203 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 KLK9Q2XQG4 91 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 TIMM50Q3ZCQ8 353 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 ZNF66Q6ZN08 573 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 UBAC2Q8NBM4 344 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 OR4A5Q8NH83 315 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 BET1LQ9NYM9 111 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 KLK9Q9UKQ9 250 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 DNAH10Q8IVF4 4471 aa13.26□□□□□ -0.29
CHCHD3-203ENST00000448878 IFITM5A6NNB3 132 aa13.25□□□□□ -0.29
CHCHD3-203ENST00000448878 IRF3Q14653 427 aa13.25□□□□□ -0.29
CHCHD3-203ENST00000448878 RCN1Q15293 331 aa13.25□□□□□ -0.29
CHCHD3-203ENST00000448878 CNIH2Q6PI25 160 aa13.25□□□□□ -0.29
CHCHD3-203ENST00000448878 SPAG16Q8N0X2 631 aa13.25□□□□□ -0.29
CHCHD3-203ENST00000448878 OR10W1Q8NGF6 305 aa13.25□□□□□ -0.29
CHCHD3-203ENST00000448878 SECTM1Q8WVN6 248 aa13.25□□□□□ -0.29
CHCHD3-203ENST00000448878 ACOT13Q9NPJ3 140 aa13.25□□□□□ -0.29
CHCHD3-203ENST00000448878 TPRKBQ9Y3C4 175 aa13.25□□□□□ -0.29
CHCHD3-203ENST00000448878 TRAV3A0A0B4J244 114 aa13.24□□□□□ -0.29
CHCHD3-203ENST00000448878 IGLC7A0M8Q6 106 aa13.24□□□□□ -0.29
CHCHD3-203ENST00000448878 MYL9P24844 172 aa13.24□□□□□ -0.29
CHCHD3-203ENST00000448878 MLLT11Q13015 90 aaPredicted RBP13.24□□□□□ -0.29
CHCHD3-203ENST00000448878 VN1R17PQ8TDU5 208 aa13.24□□□□□ -0.29
CHCHD3-203ENST00000448878 NUDCD2Q8WVJ2 157 aa13.24□□□□□ -0.29
CHCHD3-203ENST00000448878 BSCL2Q96G97 398 aaPredicted RBP13.24□□□□□ -0.29
CHCHD3-203ENST00000448878 CCL28Q9NRJ3 127 aa13.24□□□□□ -0.29
CHCHD3-203ENST00000448878 NDUFA4O00483 81 aa13.23□□□□□ -0.29
CHCHD3-203ENST00000448878 OR13C7P0DN81 318 aa13.23□□□□□ -0.29
CHCHD3-203ENST00000448878 RAB3BP20337 219 aa13.23□□□□□ -0.29
CHCHD3-203ENST00000448878 CMC4P56277 68 aaPredicted RBP13.23□□□□□ -0.29
CHCHD3-203ENST00000448878 TCTAP57738 103 aa13.23□□□□□ -0.29
CHCHD3-203ENST00000448878 EIF4EBP1Q13541 118 aaPredicted RBP13.23□□□□□ -0.29
CHCHD3-203ENST00000448878 Q56UQ5 140 aa13.23□□□□□ -0.29
CHCHD3-203ENST00000448878 HACD4Q5VWC8 232 aa13.23□□□□□ -0.29
CHCHD3-203ENST00000448878 DMBX1Q8NFW5 382 aa13.23□□□□□ -0.29
CHCHD3-203ENST00000448878 MGLLQ99685 303 aa13.23□□□□□ -0.29
CHCHD3-203ENST00000448878 DCSTAMPQ9H295 470 aa13.23□□□□□ -0.29
CHCHD3-203ENST00000448878 VCXQ9H320 206 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms