RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 RCHY1Q96PM5 261 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 FANCD2OSQ96PS1 177 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 COMMD5Q9GZQ3 224 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 PLEKHA2Q9HB19 425 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 TMEM140Q9NV12 185 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 SIGLEC8Q9NYZ4 499 aa13.46□□□□□ -0.25
DDX56-207ENST00000448192 IZUMO1RA6ND01 250 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 CGB1A6NKQ9 187 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 GGCTO75223 188 aaKnown RBP13.45□□□□□ -0.26
DDX56-207ENST00000448192 APOA1P02647 267 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 CTRB1P17538 263 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 HLA-DMAP28067 261 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 OR2B8PP59922 312 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 POU2AF1Q16633 256 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 CTRB2Q6GPI1 263 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 SNX29P2Q8IUI4 249 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 LYSMD2Q8IV50 215 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 Q8N402 240 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 OR6F1Q8NGZ6 308 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 ZMAT4Q9H898 229 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 STAB2Q8WWQ8 2551 aa13.45□□□□□ -0.26
DDX56-207ENST00000448192 PGLYRP1O75594 196 aaPredicted RBP13.44□□□□□ -0.26
DDX56-207ENST00000448192 OR2C1O95371 312 aa13.44□□□□□ -0.26
DDX56-207ENST00000448192 HIST1H1BP16401 226 aaKnown RBP13.44□□□□□ -0.26
DDX56-207ENST00000448192 HRH1P35367 487 aa13.44□□□□□ -0.26
DDX56-207ENST00000448192 ERVK-16P61578 105 aa13.44□□□□□ -0.26
DDX56-207ENST00000448192 CLEC19AQ6UXS0 136 aa13.44□□□□□ -0.26
DDX56-207ENST00000448192 GTSCR1Q86UQ5 136 aa13.44□□□□□ -0.26
DDX56-207ENST00000448192 CMTM1Q8IZ96 169 aa13.44□□□□□ -0.26
DDX56-207ENST00000448192 GPX8Q8TED1 209 aa13.44□□□□□ -0.26
DDX56-207ENST00000448192 FXYD6Q9H0Q3 95 aa13.44□□□□□ -0.26
DDX56-207ENST00000448192 COMMD9Q9P000 198 aa13.44□□□□□ -0.26
DDX56-207ENST00000448192 DMRT1Q9Y5R6 373 aa13.44□□□□□ -0.26
DDX56-207ENST00000448192 HPGDSO60760 199 aa13.43□□□□□ -0.26
DDX56-207ENST00000448192 ELK1P19419 428 aa13.43□□□□□ -0.26
DDX56-207ENST00000448192 F2RP25116 425 aa13.43□□□□□ -0.26
DDX56-207ENST00000448192 ARL3P36405 182 aa13.43□□□□□ -0.26
DDX56-207ENST00000448192 LPAR6P43657 344 aa13.43□□□□□ -0.26
DDX56-207ENST00000448192 TSPAN5P62079 268 aa13.43□□□□□ -0.26
DDX56-207ENST00000448192 DYNLRB2Q8TF09 96 aa13.43□□□□□ -0.26
DDX56-207ENST00000448192 EEF1AKMT3Q96AZ1 226 aa13.43□□□□□ -0.26
DDX56-207ENST00000448192 CCDC140Q96MF4 163 aa13.43□□□□□ -0.26
DDX56-207ENST00000448192 CMTM3Q96MX0 182 aa13.43□□□□□ -0.26
DDX56-207ENST00000448192 IGLV11-55A0A075B6I3 123 aa13.42□□□□□ -0.26
DDX56-207ENST00000448192 IGLC7A0M8Q6 106 aa13.42□□□□□ -0.26
DDX56-207ENST00000448192 GPR31O00270 319 aa13.42□□□□□ -0.26
DDX56-207ENST00000448192 RORCP51449 518 aa13.42□□□□□ -0.26
DDX56-207ENST00000448192 MECP2P51608 486 aaKnown RBP13.42□□□□□ -0.26
DDX56-207ENST00000448192 ADAMTSL5Q6ZMM2 481 aa13.42□□□□□ -0.26
DDX56-207ENST00000448192 OR10W1Q8NGF6 305 aa13.42□□□□□ -0.26
DDX56-207ENST00000448192 FCAMRQ8WWV6 532 aa13.42□□□□□ -0.26
DDX56-207ENST00000448192 DGCR14Q96DF8 476 aaKnown RBP13.42□□□□□ -0.26
DDX56-207ENST00000448192 QTRT1Q9BXR0 403 aaKnown RBP13.42□□□□□ -0.26
DDX56-207ENST00000448192 SCPEP1Q9HB40 452 aa13.42□□□□□ -0.26
DDX56-207ENST00000448192 C19orf73Q9NVV2 129 aa13.42□□□□□ -0.26
DDX56-207ENST00000448192 DNAH7Q8WXX0 4024 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 MFSD2BA6NFX1 497 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 C2orf70A6NJV1 201 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 MARCH11A6NNE9 402 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 A8MZ25 164 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 KRASP01116 189 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 FOLR2P14207 255 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 EDN2P20800 178 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 CD300EQ496F6 205 aaPredicted RBP13.41□□□□□ -0.26
DDX56-207ENST00000448192 PHLDA2Q53GA4 152 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 MZT2AQ6P582 158 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 OR2K2Q8NGT1 345 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 THAP7Q9BT49 309 aaPredicted RBP13.41□□□□□ -0.26
DDX56-207ENST00000448192 NAA50Q9GZZ1 169 aaKnown RBP13.41□□□□□ -0.26
DDX56-207ENST00000448192 TUBA4BQ9H853 241 aa13.41□□□□□ -0.26
DDX56-207ENST00000448192 TEX50A0A1B0GTY4 177 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 ZNF320A2RRD8 509 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 FAM25AB3EWG3 89 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 FAM25CB3EWG5 89 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 FAM25GB3EWG6 89 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 TRAPPC2P0DI81 140 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 TRAPPC2BP0DI82 140 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 RCVRNP35243 200 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 G6PCP35575 357 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 KLK9Q2XQG4 91 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 FAM106AQ4KMX7 169 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 GPHB5Q86YW7 130 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 CXorf58Q96LI9 332 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 SRSF8Q9BRL6 282 aaKnown RBP13.4□□□□□ -0.26
DDX56-207ENST00000448192 TM2D3Q9BRN9 247 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 HINT2Q9BX68 163 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 ZC4H2Q9NQZ6 224 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 KLK9Q9UKQ9 250 aa13.4□□□□□ -0.26
DDX56-207ENST00000448192 RYR3Q15413 4870 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 TRBV7-1A0A0A6YYK4 115 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 LGALS9O00182 355 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 SNAPC5O75971 98 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 CLEC3BP05452 202 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 FGF2P09038 288 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 SMIM18P0DKX4 95 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 OR13C7P0DN81 318 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 S100GP29377 79 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 ZNF585BQ52M93 769 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 RNASE12Q5GAN4 147 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms