RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 SPIN2AQ99865 258 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 SPIN2BQ9BPZ2 258 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 HSPB9Q9BQS6 159 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 PDCD10Q9BUL8 212 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 SHPKQ9UHJ6 478 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 RNF114Q9Y508 228 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 DUXBA0A1W2PPF3 345 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 MSGN1A6NI15 193 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 IGKV1-5P01602 117 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 IL5P05113 134 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 FGF2P09038 288 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 MECP2P51608 486 aaKnown RBP9.15□□□□□ -0.94
LINC00408-201ENST00000447784 PROK1P58294 105 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 SLC35B1P78383 322 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 ANKRD55Q3KP44 614 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 PRR31Q5SQ13 230 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 THOC7Q6I9Y2 204 aaKnown RBP9.15□□□□□ -0.94
LINC00408-201ENST00000447784 Q6ZS46 218 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 MRPL41Q8IXM3 137 aaKnown RBP9.15□□□□□ -0.94
LINC00408-201ENST00000447784 LRTM2Q8N967 370 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 UXS1Q8NBZ7 420 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 CHPT1Q8WUD6 406 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 LSM10Q969L4 123 aaKnown RBP9.15□□□□□ -0.94
LINC00408-201ENST00000447784 FYTTD1Q96QD9 318 aaKnown RBP9.15□□□□□ -0.94
LINC00408-201ENST00000447784 MARVELD1Q9BSK0 173 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 HINT2Q9BX68 163 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 CACFD1Q9UGQ2 172 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 OR51B2Q9Y5P1 312 aa9.15□□□□□ -0.94
LINC00408-201ENST00000447784 NBEAL1Q6ZS30 2694 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 TRAV41A0A0B4J266 112 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 LINC01548A6NM66 108 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 ATP6V0E1O15342 81 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 OPN1MWP04001 364 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 IGF1P05019 195 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 OPN1MW2P0DN77 364 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 OPN1MW3P0DN78 364 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 RPL27AP46776 148 aaKnown RBP9.14□□□□□ -0.95
LINC00408-201ENST00000447784 OR2B8PP59922 312 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 ECSCRQ19T08 205 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 LYZL2Q7Z4W2 148 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 C12orf45Q8N5I9 185 aaPredicted RBP9.14□□□□□ -0.95
LINC00408-201ENST00000447784 OR52B4Q8NGK2 314 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 OR5B3Q8NH48 314 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 LHFPL5Q8TAF8 219 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 MITD1Q8WV92 249 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 SRSF12Q8WXF0 261 aaKnown RBP9.14□□□□□ -0.95
LINC00408-201ENST00000447784 CITED1Q99966 193 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 SEC22CQ9BRL7 303 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.14□□□□□ -0.95
LINC00408-201ENST00000447784 NSG2Q9Y328 171 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 TMED3Q9Y3Q3 217 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 WSB1Q9Y6I7 421 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 TENM1Q9UKZ4 2725 aa9.14□□□□□ -0.95
LINC00408-201ENST00000447784 TRAV3A0A0B4J244 114 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 PSMB11A5LHX3 300 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 SNRPGP15A8MWD9 76 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 IFNA17P01571 189 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 IL6RP08887 468 aaPredicted RBP9.13□□□□□ -0.95
LINC00408-201ENST00000447784 HOXB5P09067 269 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 OR9G9P0C7N8 305 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 TRAPPC2P0DI81 140 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 TRAPPC2BP0DI82 140 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 SULT1A3P0DMM9 295 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 SULT1A4P0DMN0 295 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 SPNP16150 400 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 IZUMO4Q1ZYL8 232 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 TMEM95Q3KNT9 176 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 UNQ5815/PRO19632Q6UWF5 114 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 STPG2Q8N412 459 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 KLHDC1Q8N7A1 406 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 OR1L8Q8NGR8 309 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 GPR146Q96CH1 333 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 TMEM68Q96MH6 324 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 NOL4LQ96MY1 436 aaPredicted RBP9.13□□□□□ -0.95
LINC00408-201ENST00000447784 FAM103A1Q9BTL3 118 aaKnown RBP9.13□□□□□ -0.95
LINC00408-201ENST00000447784 QTRT1Q9BXR0 403 aaKnown RBP9.13□□□□□ -0.95
LINC00408-201ENST00000447784 ENY2Q9NPA8 101 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 SERTAD4Q9NUC0 356 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 CACNG5Q9UF02 275 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 LINC00527Q9UJ94 153 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 FOXA2Q9Y261 457 aaPredicted RBP9.13□□□□□ -0.95
LINC00408-201ENST00000447784 ZNF257Q9Y2Q1 563 aa9.13□□□□□ -0.95
LINC00408-201ENST00000447784 A0A0B4J293 547 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 TEX50A0A1B0GTY4 177 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 A0A1B0GU03 582 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 C15orf61A6NNL5 157 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 SSNA1O43805 119 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 SMCO1Q147U7 214 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 AKIRIN2Q53H80 203 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 C10orf55Q5SWW7 151 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 TMEM65Q6PI78 240 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 HSD17B13Q7Z5P4 300 aaPredicted RBP9.12□□□□□ -0.95
LINC00408-201ENST00000447784 ZNF429Q86V71 674 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 MINDY2Q8NBR6 621 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 LFNGQ8NES3 379 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 OR4X2Q8NGF9 303 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 OR1S1Q8NH92 325 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 ZNF355PQ9NSJ1 428 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 TMEM14BQ9NUH8 114 aa9.12□□□□□ -0.95
LINC00408-201ENST00000447784 ZNF580Q9UK33 172 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms