RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 SCCPDHQ8NBX0 429 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 POM121L2Q96KW2 1035 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 AARDQ4LEZ3 155 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 NINJ1Q92982 152 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 IMMP1LQ96LU5 166 aa11.59□□□□□ -0.55
VPS52-212ENST00000445902 SSBP3Q9BWW4 388 aaPredicted RBP11.59□□□□□ -0.55
VPS52-212ENST00000445902 OR5B21A6NL26 309 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 J3QT63 122 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 DNPH1O43598 174 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 HBZP02008 142 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 GRPP07492 148 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 IGLL1P15814 213 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 SLAQ13239 276 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 EFNB3Q15768 340 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 ZNF439Q8NDP4 499 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 SH2D2AQ9NP31 389 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 GCM1Q9NP62 436 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 MBNL3Q9NUK0 354 aaKnown RBP11.58□□□□□ -0.55
VPS52-212ENST00000445902 PSG11Q9UQ72 335 aa11.58□□□□□ -0.55
VPS52-212ENST00000445902 TRBV9A0A0B4J1U6 114 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 IGHV2-26A0A0B4J1V2 119 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 HELTA6NFD8 242 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 MT-CO3P00414 261 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 SSTR5P35346 364 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 CLDN18P56856 261 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 KCNE4Q8WWG9 221 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 GP6Q9HCN6 339 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 PTPRBP23467 1997 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 PINLYPA6NC86 204 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 TNXAQ16473 311 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 PRAMEF5Q5TYX0 476 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 PRAMEF6Q5VXH4 476 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 WDR73Q6P4I2 378 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 KIR3DL3Q8N743 410 aa11.58□□□□□ -0.56
VPS52-212ENST00000445902 MRPS16Q9Y3D3 137 aaKnown RBP11.58□□□□□ -0.56
VPS52-212ENST00000445902 TNCP24821 2201 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 TRGV10A0A0A0MS01 117 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 IGLC7A0M8Q6 106 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 AHRRA9YTQ3 701 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 WNT9BO14905 357 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 FCGR3BO75015 233 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 MMP23AO75900 390 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 APCSP02743 223 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 TMEM249Q2WGJ8 235 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 EBLN2Q6P2I7 272 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 VHLLQ6RSH7 139 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 MIR17HGQ75NE6 70 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 STPG3Q8N7X2 389 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 OR4F17Q8NGA8 305 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 TXNDC17Q9BRA2 123 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 MPC1Q9Y5U8 109 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 SAA2-SAA4A0A096LPE2 208 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 TRAV3A0A0B4J244 114 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 MT-ND6P03923 174 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 PSG1P11464 419 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 USF1P22415 310 aaPredicted RBP11.57□□□□□ -0.56
VPS52-212ENST00000445902 GABRA2P47869 451 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 EIF4EBP1Q13541 118 aaPredicted RBP11.57□□□□□ -0.56
VPS52-212ENST00000445902 SPATA12Q7Z6I5 190 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 NEUROG1Q92886 237 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 FAM122AQ96E09 287 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 CLCF1Q9UBD9 225 aa11.57□□□□□ -0.56
VPS52-212ENST00000445902 C9JCJ5 164 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 M0R2Z0 102 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 HSBP1O75506 76 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 AMY1AP04745 511 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 GPR6P46095 362 aaPredicted RBP11.56□□□□□ -0.56
VPS52-212ENST00000445902 PSG5Q15238 335 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 ALKBH6Q3KRA9 238 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 MPV17L2Q567V2 206 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 RNASEKQ6P5S7 137 aaKnown RBP11.56□□□□□ -0.56
VPS52-212ENST00000445902 C18orf32Q8TCD1 76 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 PKIBQ9C010 78 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 CHODLQ9H9P2 273 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 IGHV1-69-2A0A0G2JMI3 117 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 PLP2Q04941 152 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 MORN2Q502X0 79 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 FAM168AQ92567 244 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 ZC2HC1AQ96GY0 325 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 C1orf159Q96HA4 380 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 DCTN5Q9BTE1 182 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 CLEC5AQ9NY25 188 aa11.56□□□□□ -0.56
VPS52-212ENST00000445902 SS18L1O75177 396 aaPredicted RBP11.55□□□□□ -0.56
VPS52-212ENST00000445902 OR10J4P0C629 311 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 LTBRP36941 435 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 PMCHL1Q16048 86 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 ZNF826PQ6ZT77 177 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 OR4A16Q8NH70 328 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 ZNF596Q8TC21 504 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 SSBP4Q9BWG4 385 aaPredicted RBP11.55□□□□□ -0.56
VPS52-212ENST00000445902 SELENOKQ9Y6D0 94 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 TRAV9-2A0A087WT02 112 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 OR2T8A6NH00 312 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 HAND1O96004 215 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 CELA3AP09093 270 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 DUSP3P51452 185 aaPredicted RBP11.55□□□□□ -0.56
VPS52-212ENST00000445902 RHOBP62745 196 aa11.55□□□□□ -0.56
VPS52-212ENST00000445902 IBA57Q5T440 356 aaKnown RBP11.55□□□□□ -0.56
VPS52-212ENST00000445902 C19orf35Q6ZS72 473 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms