RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 TEX50A0A1B0GTY4 177 aa13.78□□□□□ -0.2
SGCE-206ENST00000445866 LINC01548A6NM66 108 aa13.78□□□□□ -0.2
SGCE-206ENST00000445866 GOSR2O14653 212 aa13.78□□□□□ -0.2
SGCE-206ENST00000445866 RPL15P61313 204 aaKnown RBP13.78□□□□□ -0.2
SGCE-206ENST00000445866 IAH1Q2TAA2 248 aaPredicted RBP13.78□□□□□ -0.2
SGCE-206ENST00000445866 ABHD5Q8WTS1 349 aa13.78□□□□□ -0.2
SGCE-206ENST00000445866 OR10C1Q96KK4 312 aa13.78□□□□□ -0.2
SGCE-206ENST00000445866 QTRT1Q9BXR0 403 aaKnown RBP13.78□□□□□ -0.2
SGCE-206ENST00000445866 SIX6O95475 246 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 IFNA17P01571 189 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 SLC25A6P12236 298 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 COMPP49747 757 aaPredicted RBP13.77□□□□□ -0.21
SGCE-206ENST00000445866 ARSJQ5FYB0 599 aaPredicted RBP13.77□□□□□ -0.21
SGCE-206ENST00000445866 GSG1LQ6UXU4 331 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 SLC35E3Q7Z769 313 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 LURAP1LQ8IV03 231 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 OR1L8Q8NGR8 309 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 OR1S1Q8NH92 325 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 GRPEL2Q8TAA5 225 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 SPIN2AQ99865 258 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 SPIN2BQ9BPZ2 258 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 HINT2Q9BX68 163 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 TMEM14BQ9NUH8 114 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 MGAT4CQ9UBM8 478 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 FOXA2Q9Y261 457 aaPredicted RBP13.77□□□□□ -0.21
SGCE-206ENST00000445866 JMJD1CQ15652 2540 aa13.77□□□□□ -0.21
SGCE-206ENST00000445866 MSGN1A6NI15 193 aa13.76□□□□□ -0.21
SGCE-206ENST00000445866 C15orf61A6NNL5 157 aa13.76□□□□□ -0.21
SGCE-206ENST00000445866 IGHG2P01859 326 aa13.76□□□□□ -0.21
SGCE-206ENST00000445866 RPL27AP46776 148 aaKnown RBP13.76□□□□□ -0.21
SGCE-206ENST00000445866 HSPE1P61604 102 aaKnown RBP13.76□□□□□ -0.21
SGCE-206ENST00000445866 C10orf55Q5SWW7 151 aa13.76□□□□□ -0.21
SGCE-206ENST00000445866 FOXRED2Q8IWF2 684 aa13.76□□□□□ -0.21
SGCE-206ENST00000445866 ZNF702PQ9H963 129 aa13.76□□□□□ -0.21
SGCE-206ENST00000445866 PARP11Q9NR21 331 aa13.76□□□□□ -0.21
SGCE-206ENST00000445866 ST8SIA3O43173 380 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 KCNAB3O43448 404 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 FGF2P09038 288 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 SSBP2P81877 361 aaPredicted RBP13.75□□□□□ -0.21
SGCE-206ENST00000445866 FCN2Q15485 313 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 Q6ZSV7 163 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 ZNF429Q86V71 674 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 ARPC1AQ92747 370 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 FYTTD1Q96QD9 318 aaKnown RBP13.75□□□□□ -0.21
SGCE-206ENST00000445866 FAM103A1Q9BTL3 118 aaKnown RBP13.75□□□□□ -0.21
SGCE-206ENST00000445866 PDCD10Q9BUL8 212 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 COA4Q9NYJ1 87 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 E7EUB6 86 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 TSPAN9O75954 239 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 NXPH3O95157 252 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 TRAPPC2P0DI81 140 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 TRAPPC2BP0DI82 140 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 CXorf66Q5JRM2 361 aaPredicted RBP13.75□□□□□ -0.21
SGCE-206ENST00000445866 OR5B3Q8NH48 314 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 SRSF12Q8WXF0 261 aaKnown RBP13.75□□□□□ -0.21
SGCE-206ENST00000445866 C2orf50Q96LR7 162 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 LINC00527Q9UJ94 153 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 WSB1Q9Y6I7 421 aa13.75□□□□□ -0.21
SGCE-206ENST00000445866 PITX3O75364 302 aa13.74□□□□□ -0.21
SGCE-206ENST00000445866 EGR2P11161 476 aaPredicted RBP13.74□□□□□ -0.21
SGCE-206ENST00000445866 RRAS2P62070 204 aaPredicted RBP13.74□□□□□ -0.21
SGCE-206ENST00000445866 NDPQ00604 133 aa13.74□□□□□ -0.21
SGCE-206ENST00000445866 ZBTB8BQ8NAP8 495 aaPredicted RBP13.74□□□□□ -0.21
SGCE-206ENST00000445866 OR5M8Q8NGP6 311 aa13.74□□□□□ -0.21
SGCE-206ENST00000445866 OR2T6Q8NHC8 308 aa13.74□□□□□ -0.21
SGCE-206ENST00000445866 NDUFA4L2Q9NRX3 87 aa13.74□□□□□ -0.21
SGCE-206ENST00000445866 CACFD1Q9UGQ2 172 aa13.74□□□□□ -0.21
SGCE-206ENST00000445866 ZNF257Q9Y2Q1 563 aa13.74□□□□□ -0.21
SGCE-206ENST00000445866 SETD2Q9BYW2 2564 aaPredicted RBP13.74□□□□□ -0.21
SGCE-206ENST00000445866 hCG_2014768A0A024R1R8 64 aa13.73□□□□□ -0.21
SGCE-206ENST00000445866 APELAP0DMC3 54 aa13.73□□□□□ -0.21
SGCE-206ENST00000445866 CXCL3P19876 107 aa13.73□□□□□ -0.21
SGCE-206ENST00000445866 SPCS3P61009 180 aa13.73□□□□□ -0.21
SGCE-206ENST00000445866 SPINK9Q5DT21 86 aa13.73□□□□□ -0.21
SGCE-206ENST00000445866 PRIMA1Q86XR5 153 aa13.73□□□□□ -0.21
SGCE-206ENST00000445866 Q8N2B8 174 aa13.73□□□□□ -0.21
SGCE-206ENST00000445866 LFNGQ8NES3 379 aa13.73□□□□□ -0.21
SGCE-206ENST00000445866 NF1P21359 2839 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 HMX3A6NHT5 357 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 AP4M1O00189 453 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 ATP6V0E1O15342 81 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 VDAC2P45880 294 aaPredicted RBP13.72□□□□□ -0.21
SGCE-206ENST00000445866 H2BFSP57053 126 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 TMEM267Q0VDI3 215 aaPredicted RBP13.72□□□□□ -0.21
SGCE-206ENST00000445866 TMEM95Q3KNT9 176 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 AARDQ4LEZ3 155 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 OR52E5Q8NH55 327 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 SGMS2Q8NHU3 365 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 NOL4LQ96MY1 436 aaPredicted RBP13.72□□□□□ -0.21
SGCE-206ENST00000445866 FBXO7Q9Y3I1 522 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 A0A1B0GVG6 124 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 A0A1B0GW64 132 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 CEBPZOSA8MTT3 80 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 IGF1P05019 195 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 NKX2-1P43699 371 aaPredicted RBP13.72□□□□□ -0.21
SGCE-206ENST00000445866 TNFRSF9Q07011 255 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 OR11H7Q8NGC8 314 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 OR10W1Q8NGF6 305 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 MAGT1Q9H0U3 335 aa13.72□□□□□ -0.21
SGCE-206ENST00000445866 CGB1A6NKQ9 187 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms