RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 REG1AP05451 166 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 GNAO1P09471 354 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 GNB3P16520 340 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 ADMP35318 185 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 PSMD7P51665 324 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 MFAP2P55001 183 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 RPL8P62917 257 aaKnown RBP10.53□□□□□ -0.72
HMGN1-208ENST00000443046 OR2B11Q5JQS5 317 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 PLET1Q6UQ28 207 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 APRG1Q8IVJ8 170 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 OR10R2Q8NGX6 335 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 OR11H2Q8NH07 326 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 OR5B3Q8NH48 314 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 OR4S2Q8NH73 311 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 MND1Q9BWT6 205 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 KRTAP4-5Q9BYR2 181 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 OR2W1Q9Y3N9 320 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 SLC22A5O76082 557 aa10.52□□□□□ -0.73
HMGN1-208ENST00000443046 DEFA4P12838 97 aa10.52□□□□□ -0.73
HMGN1-208ENST00000443046 CD36P16671 472 aa10.52□□□□□ -0.73
HMGN1-208ENST00000443046 OR2B8PP59922 312 aa10.52□□□□□ -0.73
HMGN1-208ENST00000443046 SPHARQ15513 63 aa10.52□□□□□ -0.73
HMGN1-208ENST00000443046 ZNF124Q15973 351 aa10.52□□□□□ -0.73
HMGN1-208ENST00000443046 DHRSXQ8N5I4 330 aa10.52□□□□□ -0.73
HMGN1-208ENST00000443046 CD300LFQ8TDQ1 290 aa10.52□□□□□ -0.73
HMGN1-208ENST00000443046 HSD17B10Q99714 261 aaKnown RBP10.52□□□□□ -0.73
HMGN1-208ENST00000443046 HERC1Q15751 4861 aa10.52□□□□□ -0.73
HMGN1-208ENST00000443046 IGKV1D-13A0A0B4J2D9 117 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 IGLC7A0M8Q6 106 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 IGLL5B9A064 214 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 C11orf94C9JXX5 98 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 K7EMT4 169 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 CTSDP07339 412 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-208ENST00000443046 IGKV1-13P0DP09 117 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 RPA2P15927 270 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 HIST1H1DP16402 221 aaKnown RBP10.51□□□□□ -0.73
HMGN1-208ENST00000443046 HLA-GP17693 338 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 SSX9Q7RTT3 188 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 BPIFB6Q8NFQ5 453 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 OR4A5Q8NH83 315 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 VN1R17PQ8TDU5 208 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 TMEM203Q969S6 136 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 ZNF414Q96IQ9 312 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 C6orf62Q9GZU0 229 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-208ENST00000443046 HRH4Q9H3N8 390 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 BET1LQ9NYM9 111 aa10.51□□□□□ -0.73
HMGN1-208ENST00000443046 J3QRK9 145 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 NDUFA4O00483 81 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 HRASP01112 189 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 CRHBPP24387 322 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 RANBP1P43487 201 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 LIPKQ5VXJ0 399 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 C8orf59Q8N0T1 100 aaPredicted RBP10.5□□□□□ -0.73
HMGN1-208ENST00000443046 MFSD4AQ8N468 514 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 PACRGLQ8N7B6 248 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 ATP6V0BQ99437 205 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 SRSF8Q9BRL6 282 aaKnown RBP10.5□□□□□ -0.73
HMGN1-208ENST00000443046 THYN1Q9P016 225 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 ETV7Q9Y603 341 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 V9GY05 133 aa10.5□□□□□ -0.73
HMGN1-208ENST00000443046 ERICH4A6NGS2 130 aa10.49□□□□□ -0.73
HMGN1-208ENST00000443046 F8W735 103 aaPredicted RBP10.49□□□□□ -0.73
HMGN1-208ENST00000443046 RTL8CO15255 209 aa10.49□□□□□ -0.73
HMGN1-208ENST00000443046 DEFB4AO15263 64 aa10.49□□□□□ -0.73
HMGN1-208ENST00000443046 XRCC3O43542 346 aa10.49□□□□□ -0.73
HMGN1-208ENST00000443046 ARL6IP5O75915 188 aa10.49□□□□□ -0.73
HMGN1-208ENST00000443046 NFYAP23511 347 aaPredicted RBP10.49□□□□□ -0.73
HMGN1-208ENST00000443046 DTYMKP23919 212 aa10.49□□□□□ -0.73
HMGN1-208ENST00000443046 GADD45AP24522 165 aa10.49□□□□□ -0.73
HMGN1-208ENST00000443046 CMC4P56277 68 aaPredicted RBP10.49□□□□□ -0.73
HMGN1-208ENST00000443046 TIMM50Q3ZCQ8 353 aa10.49□□□□□ -0.73
HMGN1-208ENST00000443046 TCTEX1D2Q8WW35 142 aa10.49□□□□□ -0.73
HMGN1-208ENST00000443046 BSCL2Q96G97 398 aaPredicted RBP10.49□□□□□ -0.73
HMGN1-208ENST00000443046 CHRDL1Q9BU40 450 aa10.49□□□□□ -0.73
HMGN1-208ENST00000443046 ELF5Q9UKW6 265 aaPredicted RBP10.49□□□□□ -0.73
HMGN1-208ENST00000443046 A0A075B6Q4 140 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 OR2T8A6NH00 312 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 C15orf62A8K5M9 175 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 FGF2P09038 288 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 CTXN2P0C2S0 81 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 RAB6AP20340 208 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 RPS25P62851 125 aaKnown RBP10.48□□□□□ -0.73
HMGN1-208ENST00000443046 HES5Q5TA89 166 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 SPSB3Q6PJ21 355 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 ZNF66Q6ZN08 573 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 Q8NAQ8 132 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 UFD1Q92890 307 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 RNF2Q99496 336 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 C8orf4Q9NR00 106 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 SMPXQ9UHP9 88 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 SPATA2Q9UM82 520 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 LRP1BQ9NZR2 4599 aa10.48□□□□□ -0.73
HMGN1-208ENST00000443046 TRAV3A0A0B4J244 114 aa10.47□□□□□ -0.73
HMGN1-208ENST00000443046 PRSS29PA6NIE9 313 aa10.47□□□□□ -0.73
HMGN1-208ENST00000443046 CALRP27797 417 aaKnown RBP10.47□□□□□ -0.73
HMGN1-208ENST00000443046 TALDO1P37837 337 aa10.47□□□□□ -0.73
HMGN1-208ENST00000443046 TRAM1Q15629 374 aa10.47□□□□□ -0.73
HMGN1-208ENST00000443046 POU2AF1Q16633 256 aa10.47□□□□□ -0.73
HMGN1-208ENST00000443046 GDPD1Q8N9F7 314 aa10.47□□□□□ -0.73
HMGN1-208ENST00000443046 GPHA2Q96T91 129 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms