RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ONECUT1Q9UBC0 465 aa10.7□□□□□ -0.7
CPSF4-206ENST00000441580 DIDO1Q9BTC0 2240 aaKnown RBP10.7□□□□□ -0.7
CPSF4-206ENST00000441580 ATRXP46100 2492 aa10.69□□□□□ -0.7
CPSF4-206ENST00000441580 C22orf46C9J442 243 aa10.69□□□□□ -0.7
CPSF4-206ENST00000441580 F12P00748 615 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-206ENST00000441580 IFNA4P05014 189 aa10.69□□□□□ -0.7
CPSF4-206ENST00000441580 PPT1P50897 306 aa10.69□□□□□ -0.7
CPSF4-206ENST00000441580 ZNF506Q5JVG8 444 aa10.69□□□□□ -0.7
CPSF4-206ENST00000441580 OR1L8Q8NGR8 309 aa10.69□□□□□ -0.7
CPSF4-206ENST00000441580 SFT2D1Q8WV19 159 aa10.69□□□□□ -0.7
CPSF4-206ENST00000441580 MBD3L1Q8WWY6 194 aa10.69□□□□□ -0.7
CPSF4-206ENST00000441580 RPEQ96AT9 228 aa10.69□□□□□ -0.7
CPSF4-206ENST00000441580 RPRMQ9NS64 109 aa10.69□□□□□ -0.7
CPSF4-206ENST00000441580 LAMA5O15230 3695 aa10.69□□□□□ -0.7
CPSF4-206ENST00000441580 LOC105371242A0A075B767 164 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 CTXND1A0A1B0GTU2 59 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 A0A1W2PPR1 153 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 SMCO3A2RU48 225 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 MAP1LC3B2A6NCE7 125 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 RBFOX3A6NFN3 312 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 BUB1B-PAK6H3BSN5 160 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 C19orf84I3L1E1 186 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 ENSAO43768 121 aaKnown RBP10.68□□□□□ -0.7
CPSF4-206ENST00000441580 COX7A1P24310 79 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 TAGLN2P37802 199 aaKnown RBP10.68□□□□□ -0.7
CPSF4-206ENST00000441580 RPS16P62249 146 aaKnown RBP10.68□□□□□ -0.7
CPSF4-206ENST00000441580 ACOT6Q3I5F7 207 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-206ENST00000441580 C2orf83Q53S99 150 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 FFAR4Q5NUL3 377 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 SP5Q6BEB4 398 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-206ENST00000441580 OR4P4Q8NGL7 312 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 SCRT1Q9BWW7 348 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 MAP1LC3BQ9GZQ8 125 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 SLC35B3Q9H1N7 401 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 RFNGQ9Y644 331 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 DSPP15924 2871 aaKnown RBP10.68□□□□□ -0.7
CPSF4-206ENST00000441580 ROS1P08922 2347 aa10.68□□□□□ -0.7
CPSF4-206ENST00000441580 HIVEP3Q5T1R4 2406 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 SRRM4A7MD48 611 aaKnown RBP10.67□□□□□ -0.7
CPSF4-206ENST00000441580 RRHO14718 337 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 LY6HO94772 140 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 CA2P00918 260 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 IGLV2-23P01705 113 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 HSPB1P04792 205 aaKnown RBP10.67□□□□□ -0.7
CPSF4-206ENST00000441580 CDKN1AP38936 164 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 CEACAM3P40198 252 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 OPRK1P41145 380 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 RAB31Q13636 194 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 BSXQ3C1V8 233 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 KHDC3LQ587J8 217 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 OR11H6Q8NGC7 330 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 OR10G4Q8NGN3 311 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 HINT2Q9BX68 163 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 ACTR3CQ9C0K3 210 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-206ENST00000441580 COL6A6A6NMZ7 2263 aa10.67□□□□□ -0.7
CPSF4-206ENST00000441580 IGHV1-3A0A0C4DH29 117 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 TEX50A0A1B0GTY4 177 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 LOC102723971A0A1B0GUV8 181 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 A0A1B0GV50 99 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 NDUFS6O75380 124 aaKnown RBP10.66□□□□□ -0.7
CPSF4-206ENST00000441580 BCL2P10415 239 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 MAS1LP35410 378 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 ERHP84090 104 aaKnown RBP10.66□□□□□ -0.7
CPSF4-206ENST00000441580 PMS2P11Q13670 270 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 GUCA2BQ16661 112 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 ACSM6Q6P461 480 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 C1orf122Q6ZSJ8 110 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 MMD2Q8IY49 270 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 PNKDQ8N490 385 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 TEX45Q8NA69 505 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 CLDND2Q8NHS1 167 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 TMEM170AQ8WVE7 144 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 RNF5Q99942 180 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 NDUFA4L2Q9NRX3 87 aa10.66□□□□□ -0.7
CPSF4-206ENST00000441580 KLF2Q9Y5W3 355 aaPredicted RBP10.66□□□□□ -0.7
CPSF4-206ENST00000441580 TET2Q6N021 2002 aaPredicted RBP10.66□□□□□ -0.7
CPSF4-206ENST00000441580 PKD1L2Q7Z442 2459 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 CHD8Q9HCK8 2581 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 ODF3BA8MYP8 253 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 SEC14L6B5MCN3 397 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 CYB5BO43169 146 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 IGHV2-5P01817 119 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 PRTN3P24158 256 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 HTR1DP28221 377 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 CDC34P49427 236 aaPredicted RBP10.65□□□□□ -0.7
CPSF4-206ENST00000441580 BTN1A1Q13410 526 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 DIAPH2-AS1Q14236 149 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 ZNF726P1Q15940 193 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 TPTE2P1Q5T6R2 138 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 TREML4Q6UXN2 200 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 OR10G9Q8NGN4 311 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 OR10G7Q8NGN6 311 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 GGTLC1Q9BX51 225 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 VSIRQ9H7M9 311 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 SLC25A22Q9H936 323 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 NPVFQ9HCQ7 196 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 MANBALQ9NQG1 85 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 SLC39A9Q9NUM3 307 aa10.65□□□□□ -0.7
CPSF4-206ENST00000441580 LSM4Q9Y4Z0 139 aaKnown RBP10.65□□□□□ -0.7
CPSF4-206ENST00000441580 INSIG2Q9Y5U4 225 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms