RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 C1QL4Q86Z23 238 aa13.86□□□□□ -0.19
CCDC188-201ENST00000439765 MITD1Q8WV92 249 aa13.86□□□□□ -0.19
CCDC188-201ENST00000439765 FAM103A1Q9BTL3 118 aaKnown RBP13.86□□□□□ -0.19
CCDC188-201ENST00000439765 PLEKHA2Q9HB19 425 aa13.86□□□□□ -0.19
CCDC188-201ENST00000439765 ALG5Q9Y673 324 aa13.86□□□□□ -0.19
CCDC188-201ENST00000439765 A0A0B4J2A0 478 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 SRRM4A7MD48 611 aaKnown RBP13.85□□□□□ -0.19
CCDC188-201ENST00000439765 CREBL2O60519 120 aaPredicted RBP13.85□□□□□ -0.19
CCDC188-201ENST00000439765 IGKV1-39P01597 117 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 IGKV1D-39P04432 117 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 LGALS7P47929 136 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 GNB1P62873 340 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 TEX38Q6PEX7 206 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 SELENOHQ8IZQ5 122 aaKnown RBP13.85□□□□□ -0.19
CCDC188-201ENST00000439765 LGI3Q8N145 548 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 LRTM2Q8N967 370 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 COQ8AQ8NI60 647 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 LHFPL5Q8TAF8 219 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 PHB2Q99623 299 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 SHPKQ9UHJ6 478 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 ZNF580Q9UK33 172 aa13.85□□□□□ -0.19
CCDC188-201ENST00000439765 TRAV41A0A0B4J266 112 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 S1PR2O95136 353 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 RPLP1P05386 114 aaKnown RBP13.84□□□□□ -0.19
CCDC188-201ENST00000439765 PF4V1P10720 104 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 SRPXP78539 464 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 PJVKQ0ZLH3 352 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 KPRPQ5T749 579 aaPredicted RBP13.84□□□□□ -0.19
CCDC188-201ENST00000439765 TMEM268Q5VZI3 342 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 C18orf65Q6ZTR6 163 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 PPP1R27Q86WC6 154 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 ZNF695Q8IW36 515 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 C12orf45Q8N5I9 185 aaPredicted RBP13.84□□□□□ -0.19
CCDC188-201ENST00000439765 COMMD1Q8N668 190 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 OR4F17Q8NGA8 305 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 GRPEL2Q8TAA5 225 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 OSR1Q8TAX0 266 aaPredicted RBP13.84□□□□□ -0.19
CCDC188-201ENST00000439765 IL22RA2Q969J5 263 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 OR4F4Q96R69 305 aa13.84□□□□□ -0.19
CCDC188-201ENST00000439765 SAA1P0DJI8 122 aaPredicted RBP13.83□□□□□ -0.2
CCDC188-201ENST00000439765 RPL23AP62750 156 aaKnown RBP13.83□□□□□ -0.2
CCDC188-201ENST00000439765 BEAN1Q3B7T3 259 aa13.83□□□□□ -0.2
CCDC188-201ENST00000439765 VMA21Q3ZAQ7 101 aa13.83□□□□□ -0.2
CCDC188-201ENST00000439765 SAMD5Q5TGI4 173 aa13.83□□□□□ -0.2
CCDC188-201ENST00000439765 VKORC1L1Q8N0U8 176 aa13.83□□□□□ -0.2
CCDC188-201ENST00000439765 ARPC1AQ92747 370 aa13.83□□□□□ -0.2
CCDC188-201ENST00000439765 RBPMSQ93062 196 aaKnown RBP13.83□□□□□ -0.2
CCDC188-201ENST00000439765 COMMD9Q9P000 198 aa13.83□□□□□ -0.2
CCDC188-201ENST00000439765 TNCP24821 2201 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 PIGBOS1A0A0B4J2F0 54 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 A0A1W2PN81 502 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 NUDT19A8MXV4 375 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 IGHG4P01861 327 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 CRYGBP07316 175 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 NQO2P16083 231 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 CHRNA7P36544 502 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 UBE2KP61086 200 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 SSBP2P81877 361 aaPredicted RBP13.82□□□□□ -0.2
CCDC188-201ENST00000439765 FOXE3Q13461 319 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 CXorf66Q5JRM2 361 aaPredicted RBP13.82□□□□□ -0.2
CCDC188-201ENST00000439765 ZNF562Q6V9R5 426 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 KLHL30-AS1Q8NEE0 82 aa13.82□□□□□ -0.2
CCDC188-201ENST00000439765 DBX1A6NMT0 343 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 G3V4G9 280 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 CNIH1O95406 144 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 HRASP01112 189 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 PPIFP30405 207 aaKnown RBP13.81□□□□□ -0.2
CCDC188-201ENST00000439765 FXYD3Q14802 87 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 POU2AF1Q16633 256 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 C8orf86Q6ZUL3 223 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 LYZL2Q7Z4W2 148 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 SLC35G3Q8N808 338 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 UXS1Q8NBZ7 420 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 SEC22AQ96IW7 307 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 AIFM2Q9BRQ8 373 aa13.81□□□□□ -0.2
CCDC188-201ENST00000439765 DUXBA0A1W2PPF3 345 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 SSNA1O43805 119 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 ATG12O94817 140 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 KRASP01116 189 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 PF4P02776 101 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 EGR2P11161 476 aaPredicted RBP13.8□□□□□ -0.2
CCDC188-201ENST00000439765 PSMB8P28062 276 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 G6PCP35575 357 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 C19orf54Q5BKX5 351 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 UNQ5815/PRO19632Q6UWF5 114 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 LFNGQ8NES3 379 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 RHOVQ96L33 236 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 MARCH11A6NNE9 402 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 SOX15O60248 233 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 IGKV1-5P01602 117 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 ELANEP08246 267 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 HOXB5P09067 269 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 CRIP2P52943 208 aaPredicted RBP13.8□□□□□ -0.2
CCDC188-201ENST00000439765 TNXAQ16473 311 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 MRGPRG-AS1Q2M3A8 158 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 SSX9Q7RTT3 188 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 RNF152Q8N8N0 203 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 DMBX1Q8NFW5 382 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 KLK15Q9H2R5 256 aa13.8□□□□□ -0.2
CCDC188-201ENST00000439765 ZFP57Q9NU63 452 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms