RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 DIAPH2-AS1Q14236 149 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 HLA-DRB5Q30154 266 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 ZNF787Q6DD87 383 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 ZNF709Q8N972 641 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 BEND2Q8NDZ0 799 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 CLDND2Q8NHS1 167 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 VSTM2AQ8TAG5 236 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 TMEM167AQ8TBQ9 72 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 CLEC7AQ9BXN2 247 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 PLEKHA3Q9HB20 300 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 NBASA2RRP1 2371 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 ABCA4P78363 2273 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 TEX50A0A1B0GTY4 177 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 LOC102723971A0A1B0GUV8 181 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 hCG_1809904A0A1W2PP81 198 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 A0A1W2PPE2 198 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 A0A1W2PR64 198 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 A0A1W2PRV1 198 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 MAP1LC3B2A6NCE7 125 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 FAM74A7A6NL05 159 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 F12P00748 615 aaPredicted RBP9.55□□□□□ -0.88
SMAD3-202ENST00000439724 IGKV1D-33P01593 117 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 IGKV1-33P01594 117 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 HSPB1P04792 205 aaKnown RBP9.55□□□□□ -0.88
SMAD3-202ENST00000439724 LIPFP07098 398 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 MYOD1P15172 320 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 NPBWR1P48145 328 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 PMS2P11Q13670 270 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 ICAM4Q14773 271 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 FAM74A3Q4VXF1 159 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 KHDC3LQ587J8 217 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 SSX7Q7RTT5 188 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 RPP25LQ8N5L8 163 aaKnown RBP9.55□□□□□ -0.88
SMAD3-202ENST00000439724 Q8N7P7 452 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 CLRN3Q8NCR9 226 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 RARRES2Q99969 163 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 MAP1LC3BQ9GZQ8 125 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 PATZ1Q9HBE1 687 aaKnown RBP9.55□□□□□ -0.88
SMAD3-202ENST00000439724 MALRD1Q5VYJ5 2156 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 CHD8Q9HCK8 2581 aa9.55□□□□□ -0.88
SMAD3-202ENST00000439724 CTXND1A0A1B0GTU2 59 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 A6NNC1 897 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 C22orf46C9J442 243 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 FNDC10F2Z333 226 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 INS-IGF2F8WCM5 200 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 CA2P00918 260 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 IGLV2-23P01705 113 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 IFNA4P05014 189 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 SRP19P09132 144 aaKnown RBP9.54□□□□□ -0.88
SMAD3-202ENST00000439724 RPL8P62917 257 aaKnown RBP9.54□□□□□ -0.88
SMAD3-202ENST00000439724 HAGHQ16775 308 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 FFAR4Q5NUL3 377 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 LCN15Q6UWW0 184 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 TREML4Q6UXN2 200 aa9.54□□□□□ -0.88
SMAD3-202ENST00000439724 UNKLQ9H9P5 680 aaKnown RBP9.54□□□□□ -0.88
SMAD3-202ENST00000439724 AMMECR1Q9Y4X0 333 aaPredicted RBP9.54□□□□□ -0.88
SMAD3-202ENST00000439724 BUB1B-PAK6H3BSN5 160 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 C19orf84I3L1E1 186 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 LGALS7P47929 136 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 BSXQ3C1V8 233 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 ACOT6Q3I5F7 207 aaPredicted RBP9.53□□□□□ -0.88
SMAD3-202ENST00000439724 VMA21Q3ZAQ7 101 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 C2orf83Q53S99 150 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 OR10G4Q8NGN3 311 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 OR10G9Q8NGN4 311 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 OR10G7Q8NGN6 311 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 OR1L8Q8NGR8 309 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 HINT2Q9BX68 163 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 ACTR3CQ9C0K3 210 aaPredicted RBP9.53□□□□□ -0.88
SMAD3-202ENST00000439724 COMMD5Q9GZQ3 224 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 SLC39A9Q9NUM3 307 aa9.53□□□□□ -0.88
SMAD3-202ENST00000439724 SMCO3A2RU48 225 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 M0R1W7 72 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 NUPL2O15504 423 aaKnown RBP9.52□□□□□ -0.88
SMAD3-202ENST00000439724 BCL2P10415 239 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 OPRK1P41145 380 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 HNF4GQ14541 408 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 SOHLH1Q5JUK2 328 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 OR4P4Q8NGL7 312 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 FAM122AQ96E09 287 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 SSBP3Q9BWW4 388 aaPredicted RBP9.52□□□□□ -0.88
SMAD3-202ENST00000439724 UBTD1Q9HAC8 227 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 NPVFQ9HCQ7 196 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 NDUFA4L2Q9NRX3 87 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 KCNIP2Q9NS61 270 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 GNG13Q9P2W3 67 aa9.52□□□□□ -0.88
SMAD3-202ENST00000439724 LSM4Q9Y4Z0 139 aaKnown RBP9.52□□□□□ -0.88
SMAD3-202ENST00000439724 A0A1W2PN81 502 aa9.51□□□□□ -0.89
SMAD3-202ENST00000439724 SEC14L6B5MCN3 397 aa9.51□□□□□ -0.89
SMAD3-202ENST00000439724 LY6LH3BQJ8 138 aa9.51□□□□□ -0.89
SMAD3-202ENST00000439724 TSPAN4O14817 238 aa9.51□□□□□ -0.89
SMAD3-202ENST00000439724 CYB5BO43169 146 aa9.51□□□□□ -0.89
SMAD3-202ENST00000439724 GOSR1O95249 250 aa9.51□□□□□ -0.89
SMAD3-202ENST00000439724 IFNA1P01562 189 aa9.51□□□□□ -0.89
SMAD3-202ENST00000439724 OR13C7P0DN81 318 aa9.51□□□□□ -0.89
SMAD3-202ENST00000439724 RNASE2P10153 161 aaKnown RBP9.51□□□□□ -0.89
SMAD3-202ENST00000439724 CHRNA7P36544 502 aa9.51□□□□□ -0.89
SMAD3-202ENST00000439724 GPR6P46095 362 aaPredicted RBP9.51□□□□□ -0.89
SMAD3-202ENST00000439724 FGF8P55075 233 aaPredicted RBP9.51□□□□□ -0.89
SMAD3-202ENST00000439724 ARSJQ5FYB0 599 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms