RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 SDSLQ96GA7 329 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 LY96Q9Y6Y9 160 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 MED13Q9UHV7 2174 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 ZNF705FA8MVS1 300 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 KLRC4-KLRK1H3BQV0 150 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 SPINT2O43291 252 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 GFRA3O60609 400 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 ZNF705DP0CH99 300 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 ZNF705BP0CI00 300 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 IGHV1-2P23083 117 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 PRAMEF5Q5TYX0 476 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 PRAMEF6Q5VXH4 476 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 OR4A16Q8NH70 328 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 RFESDQ8TAC1 157 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 FAM216AQ8WUB2 273 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 C9JCJ5 164 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 K7EN84 100 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 FCGR3BO75015 233 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 CBLN1P23435 193 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 GPR12P47775 334 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 TGFBR3Q03167 851 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 ZNF90Q03938 601 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 C1orf159Q96HA4 380 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 HEYLQ9NQ87 328 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 SPENQ96T58 3664 aaKnown RBP12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 TNFSF13O75888 250 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 GCHFRP30047 84 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 SPRR3Q9UBC9 169 aa12.63□□□□□ -0.39
CDC42EP4-202ENST00000439510 URB1O60287 2271 aaKnown RBP12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 C21orf140B9A014 251 aa12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 AQP7O14520 342 aa12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 THBS3P49746 956 aa12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 LGALS4P56470 323 aa12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 RANP62826 216 aaKnown RBP12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 RPL31P62899 125 aaKnown RBP12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 HLA-DRB5Q30154 266 aa12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 SMIM21Q3B7S5 101 aa12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 TMEM164Q5U3C3 297 aa12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 INO80CQ6PI98 192 aaPredicted RBP12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 MRPL18Q9H0U6 180 aaKnown RBP12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 DLL1O00548 723 aa12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 CRISP2P16562 243 aa12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 RELBQ01201 579 aa12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 TOMM20LQ6UXN7 152 aa12.62□□□□□ -0.39
CDC42EP4-202ENST00000439510 SERF1AO75920 110 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 HNF1AP20823 631 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 RPL29P47914 159 aaKnown RBP12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 TMPRSS7Q7RTY8 843 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 FAM90A1Q86YD7 464 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 MIEN1Q9BRT3 115 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 DEFB127Q9H1M4 99 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 TRGV10A0A0A0MS01 117 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 TRGV8A0A0C4DH27 118 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 IL6RP08887 468 aaPredicted RBP12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 Q0VG73 95 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 EFNB3Q15768 340 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 DCTN5Q9BTE1 182 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 NPVFQ9HCQ7 196 aa12.61□□□□□ -0.39
CDC42EP4-202ENST00000439510 LYZL6O75951 148 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 CD33P20138 364 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 RHOBP62745 196 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 NHLH1Q02575 133 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 ABHD12Q8N2K0 398 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 TRGV5A0A0B4J1U4 118 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 SLC17A3O00476 420 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 AREGP15514 252 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 ERVK-16P61578 105 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 MORN2Q502X0 79 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 CD177Q8N6Q3 437 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 SEPSECSQ9HD40 501 aaKnown RBP12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 JPT1Q9UK76 154 aa12.6□□□□□ -0.39
CDC42EP4-202ENST00000439510 TRBV9A0A0B4J1U6 114 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 TDRG1Q3Y452 100 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 ARSJQ5FYB0 599 aaPredicted RBP12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 ZNF705AQ6ZN79 300 aaPredicted RBP12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 VKORC1L1Q8N0U8 176 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 OR1L6Q8NGR2 347 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 SSMEM1Q8WWF3 244 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 EAF1Q96JC9 268 aaPredicted RBP12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 HSPB9Q9BQS6 159 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 OPN3Q9H1Y3 402 aaPredicted RBP12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 TRAV3A0A0B4J244 114 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 A8MXE2 369 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 M0R1X1 148 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 MT-CO2P00403 227 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 RPLP1P05386 114 aaKnown RBP12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 TMEM183BQ1AE95 376 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 KRTCAP3Q53RY4 240 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 RNFT1Q5M7Z0 435 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 STPG3Q8N7X2 389 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 OR5AU1Q8NGC0 362 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 TMEM140Q9NV12 185 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 IL17BQ9UHF5 180 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 TCF19Q9Y242 345 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 ARL2-SNX15V9GYD0 113 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 IGKV3-15P01624 115 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 ZNF25P17030 456 aaPredicted RBP12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 CDKN1AP38936 164 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 RPEL1Q2QD12 228 aa12.59□□□□□ -0.39
CDC42EP4-202ENST00000439510 SPATA31B1PQ5VZV4 182 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms