RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 CMTM2Q8TAZ6 248 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 LSM10Q969L4 123 aaKnown RBP9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 RBKSQ9H477 322 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 RNF24Q9Y225 148 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 UBE2CO00762 179 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 APELAP0DMC3 54 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 BPIFB3P59826 476 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 MRPL54Q6P161 138 aaKnown RBP9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 SRRM5B3KS81 715 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 MLNRO43193 412 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 IGHV1-46P01743 117 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 MBNL2Q5VZF2 373 aaKnown RBP9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 FREM2Q5SZK8 3169 aa9.69□□□□□ -0.86
TRAPPC9-202ENST00000438773 SPCS3P61009 180 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 CDPF1Q6NVV7 123 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 ASCL4Q6XD76 172 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 FAM90A1Q86YD7 464 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 TMEM140Q9NV12 185 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 OR51B2Q9Y5P1 312 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 C17orf98A8MV24 154 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 ZG16O60844 167 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 TNFSF13O75888 250 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 SELLP14151 372 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 PAX6P26367 422 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 HNRNPA3P51991 378 aaKnown RBP9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 ARF6P62330 175 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 CLEC2AQ6UVW9 174 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 ZNF596Q8TC21 504 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 TBX15Q96SF7 602 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 SRD5A3Q9H8P0 318 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 MALRD1Q5VYJ5 2156 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 VPS13AQ96RL7 3174 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 DDTP30046 118 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 GFI1BQ5VTD9 330 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 C16orf82Q7Z2V1 217 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 GNB4Q9HAV0 340 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 TECRQ9NZ01 308 aaKnown RBP9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 EML6Q6ZMW3 1958 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 PPIAL4CA0A0B4J2A2 164 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 CSN3P07498 182 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 PPIAL4GP0DN37 164 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 ERVFRD-1P60508 538 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 MMDQ15546 238 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 KIAA1644Q3SXP7 199 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 ABHD12Q8N2K0 398 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 OR4C12Q96R67 309 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 SEBOXQ9HB31 216 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 HILPDAQ9Y5L2 63 aa9.68□□□□□ -0.86
TRAPPC9-202ENST00000438773 KBTBD11-OT1A0A1B0GTJ5 212 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 GRIFINA4D1Z8 144 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 FAM90A26D6RGX4 464 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 K7EM74 188 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 M0R143 59 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 TCF21O43680 179 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 S100A7P31151 101 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 C11orf94C9JXX5 98 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 IGLV3-1P01715 115 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 RBP4P02753 201 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 LYL1P12980 280 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 AGAP20933 346 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 FCER1GP30273 86 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 RHOBP62745 196 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 IL15RAQ13261 267 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 SLC24A4Q8NFF2 622 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 RALYQ9UKM9 306 aaKnown RBP9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 LRP4O75096 1905 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 FOLR2P14207 255 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 IER3P46695 156 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 SIRT7Q9NRC8 400 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 TUBD1Q9UJT1 453 aa9.67□□□□□ -0.86
TRAPPC9-202ENST00000438773 CD1BP29016 333 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 PTTG1IPP53801 180 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 RNASEKQ6P5S7 137 aaKnown RBP9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 LURAP1LQ8IV03 231 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 OR9G1Q8NH87 305 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 WFDC1Q9HC57 220 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 TMEM56-RWDD3S4R434 201 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 IGSF23A1L1A6 192 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 SLC31A2O15432 143 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 CRISP2P16562 243 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 CCL3L1P16619 93 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 GNLYP22749 145 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 MC5RP33032 325 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 CCL20P78556 96 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 ZNF324BQ6AW86 544 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 SGMS2Q8NHU3 365 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 CRIM1Q9NZV1 1036 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 METRNQ9UJH8 293 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 CPAMD8Q8IZJ3 1885 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 LYNX1G3V0Z9 82 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 ZNF253O75346 499 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 LYNX1P0DP58 116 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 SCGB2A2Q13296 93 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 Q6ZN92 141 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 ZNF835Q9Y2P0 537 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 FRYLO94915 3013 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 COL4A2P08572 1712 aa9.66□□□□□ -0.86
TRAPPC9-202ENST00000438773 SLC25A17O43808 307 aa9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 HSPB1P04792 205 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-202ENST00000438773 TPPP2P59282 170 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms