RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 FBXL7Q9UJT9 491 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 S4R3C0 116 aa14□□□□□ -0.17
HMGN1-207ENST00000436324 CGB1A6NKQ9 187 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 NPIPB5A8MRT5 1133 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 M0QYG6 137 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 BMPR1BO00238 502 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 GPR31O00270 319 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 IGHV3-23P01764 117 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 PSMB6P28072 239 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 POU2AF1Q16633 256 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 TATDN3Q17R31 274 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 CMTM1Q8IZ96 169 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 EXTL2Q9UBQ6 330 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 SMAD5-AS1Q9Y6J3 95 aa13.99□□□□□ -0.17
HMGN1-207ENST00000436324 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.98□□□□□ -0.17
HMGN1-207ENST00000436324 NDUFB8O95169 186 aa13.98□□□□□ -0.17
HMGN1-207ENST00000436324 DEFA4P12838 97 aa13.98□□□□□ -0.17
HMGN1-207ENST00000436324 F2RP25116 425 aa13.98□□□□□ -0.17
HMGN1-207ENST00000436324 OR2B8PP59922 312 aa13.98□□□□□ -0.17
HMGN1-207ENST00000436324 ERVK-16P61578 105 aa13.98□□□□□ -0.17
HMGN1-207ENST00000436324 IL34Q6ZMJ4 242 aa13.98□□□□□ -0.17
HMGN1-207ENST00000436324 FCAMRQ8WWV6 532 aa13.98□□□□□ -0.17
HMGN1-207ENST00000436324 DGCR14Q96DF8 476 aaKnown RBP13.98□□□□□ -0.17
HMGN1-207ENST00000436324 FANCD2OSQ96PS1 177 aa13.98□□□□□ -0.17
HMGN1-207ENST00000436324 COMMD5Q9GZQ3 224 aa13.98□□□□□ -0.17
HMGN1-207ENST00000436324 COMMD9Q9P000 198 aa13.98□□□□□ -0.17
HMGN1-207ENST00000436324 PPP5D1E7EU14 171 aa13.97□□□□□ -0.17
HMGN1-207ENST00000436324 KRASP01116 189 aa13.97□□□□□ -0.17
HMGN1-207ENST00000436324 IGLV1-51P01701 117 aa13.97□□□□□ -0.17
HMGN1-207ENST00000436324 CRYGCP07315 174 aa13.97□□□□□ -0.17
HMGN1-207ENST00000436324 SPCS2Q15005 226 aa13.97□□□□□ -0.17
HMGN1-207ENST00000436324 CLVS1Q8IUQ0 354 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-207ENST00000436324 OR52I2Q8NH67 350 aa13.97□□□□□ -0.17
HMGN1-207ENST00000436324 KLK11Q9UBX7 282 aa13.97□□□□□ -0.17
HMGN1-207ENST00000436324 DHFRP00374 187 aa13.96□□□□□ -0.17
HMGN1-207ENST00000436324 HLA-AP01891 365 aaKnown RBP13.96□□□□□ -0.17
HMGN1-207ENST00000436324 CSN3P07498 182 aa13.96□□□□□ -0.17
HMGN1-207ENST00000436324 CTRB1P17538 263 aa13.96□□□□□ -0.17
HMGN1-207ENST00000436324 G6PCP35575 357 aa13.96□□□□□ -0.17
HMGN1-207ENST00000436324 ZNF585BQ52M93 769 aa13.96□□□□□ -0.17
HMGN1-207ENST00000436324 CTRB2Q6GPI1 263 aa13.96□□□□□ -0.17
HMGN1-207ENST00000436324 OR10W1Q8NGF6 305 aa13.96□□□□□ -0.17
HMGN1-207ENST00000436324 NSG2Q9Y328 171 aa13.96□□□□□ -0.17
HMGN1-207ENST00000436324 MARCH11A6NNE9 402 aa13.95□□□□□ -0.18
HMGN1-207ENST00000436324 RGS5O15539 181 aa13.95□□□□□ -0.18
HMGN1-207ENST00000436324 S100GP29377 79 aa13.95□□□□□ -0.18
HMGN1-207ENST00000436324 LPCAT3Q6P1A2 487 aa13.95□□□□□ -0.18
HMGN1-207ENST00000436324 CLEC19AQ6UXS0 136 aa13.95□□□□□ -0.18
HMGN1-207ENST00000436324 TBC1D26Q86UD7 250 aa13.95□□□□□ -0.18
HMGN1-207ENST00000436324 ABHD1Q96SE0 405 aa13.95□□□□□ -0.18
HMGN1-207ENST00000436324 HINT2Q9BX68 163 aa13.95□□□□□ -0.18
HMGN1-207ENST00000436324 MIXL1Q9H2W2 232 aa13.95□□□□□ -0.18
HMGN1-207ENST00000436324 SORL1Q92673 2214 aa13.95□□□□□ -0.18
HMGN1-207ENST00000436324 TEX50A0A1B0GTY4 177 aa13.94□□□□□ -0.18
HMGN1-207ENST00000436324 IGLC7A0M8Q6 106 aa13.94□□□□□ -0.18
HMGN1-207ENST00000436324 CTDSP2O14595 271 aa13.94□□□□□ -0.18
HMGN1-207ENST00000436324 OR2C1O95371 312 aa13.94□□□□□ -0.18
HMGN1-207ENST00000436324 CD3DP04234 171 aa13.94□□□□□ -0.18
HMGN1-207ENST00000436324 IFNA6P05013 189 aa13.94□□□□□ -0.18
HMGN1-207ENST00000436324 NHLRC4P0CG21 123 aaPredicted RBP13.94□□□□□ -0.18
HMGN1-207ENST00000436324 PGAM2P15259 253 aa13.94□□□□□ -0.18
HMGN1-207ENST00000436324 QTRT1Q9BXR0 403 aaKnown RBP13.94□□□□□ -0.18
HMGN1-207ENST00000436324 PEMTQ9UBM1 199 aa13.94□□□□□ -0.18
HMGN1-207ENST00000436324 DNAH9Q9NYC9 4486 aa13.93□□□□□ -0.18
HMGN1-207ENST00000436324 GGCTO75223 188 aaKnown RBP13.93□□□□□ -0.18
HMGN1-207ENST00000436324 TRAPPC2P0DI81 140 aa13.93□□□□□ -0.18
HMGN1-207ENST00000436324 TRAPPC2BP0DI82 140 aa13.93□□□□□ -0.18
HMGN1-207ENST00000436324 HIST1H1BP16401 226 aaKnown RBP13.93□□□□□ -0.18
HMGN1-207ENST00000436324 RNASE10Q5GAN6 216 aaKnown RBP13.93□□□□□ -0.18
HMGN1-207ENST00000436324 LAX1Q8IWV1 398 aa13.93□□□□□ -0.18
HMGN1-207ENST00000436324 SLC38A6Q8IZM9 456 aa13.93□□□□□ -0.18
HMGN1-207ENST00000436324 OR1L8Q8NGR8 309 aa13.93□□□□□ -0.18
HMGN1-207ENST00000436324 EEF1AKMT3Q96AZ1 226 aa13.93□□□□□ -0.18
HMGN1-207ENST00000436324 CCDC140Q96MF4 163 aa13.93□□□□□ -0.18
HMGN1-207ENST00000436324 DMRT1Q9Y5R6 373 aa13.93□□□□□ -0.18
HMGN1-207ENST00000436324 IGLV11-55A0A075B6I3 123 aa13.92□□□□□ -0.18
HMGN1-207ENST00000436324 MFSD2BA6NFX1 497 aa13.92□□□□□ -0.18
HMGN1-207ENST00000436324 H0Y980 276 aa13.92□□□□□ -0.18
HMGN1-207ENST00000436324 SNAPC5O75971 98 aa13.92□□□□□ -0.18
HMGN1-207ENST00000436324 OR13C7P0DN81 318 aa13.92□□□□□ -0.18
HMGN1-207ENST00000436324 ARL3P36405 182 aa13.92□□□□□ -0.18
HMGN1-207ENST00000436324 UCP3P55916 312 aa13.92□□□□□ -0.18
HMGN1-207ENST00000436324 ZC4H2Q9NQZ6 224 aa13.92□□□□□ -0.18
HMGN1-207ENST00000436324 MTFP1Q9UDX5 166 aa13.92□□□□□ -0.18
HMGN1-207ENST00000436324 OR51B2Q9Y5P1 312 aa13.92□□□□□ -0.18
HMGN1-207ENST00000436324 U3KQK5 164 aa13.92□□□□□ -0.18
HMGN1-207ENST00000436324 IZUMO1RA6ND01 250 aa13.91□□□□□ -0.18
HMGN1-207ENST00000436324 FRMD6-AS1P0C7T7 363 aa13.91□□□□□ -0.18
HMGN1-207ENST00000436324 PI3P19957 117 aa13.91□□□□□ -0.18
HMGN1-207ENST00000436324 EDN2P20800 178 aa13.91□□□□□ -0.18
HMGN1-207ENST00000436324 FAM209BQ5JX69 171 aa13.91□□□□□ -0.18
HMGN1-207ENST00000436324 SLC25A24Q6NUK1 477 aa13.91□□□□□ -0.18
HMGN1-207ENST00000436324 ADAMTSL5Q6ZMM2 481 aa13.91□□□□□ -0.18
HMGN1-207ENST00000436324 SBSPONQ8IVN8 264 aa13.91□□□□□ -0.18
HMGN1-207ENST00000436324 Q8N1Y9 231 aa13.91□□□□□ -0.18
HMGN1-207ENST00000436324 OR4D10Q8NGI6 311 aa13.91□□□□□ -0.18
HMGN1-207ENST00000436324 RAB2BQ8WUD1 216 aa13.91□□□□□ -0.18
HMGN1-207ENST00000436324 SRSF8Q9BRL6 282 aaKnown RBP13.91□□□□□ -0.18
HMGN1-207ENST00000436324 PPP5CP53041 499 aa13.9□□□□□ -0.18
HMGN1-207ENST00000436324 WT1-ASQ06250 92 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms