RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 SH2D7A6NKC9 451 aaPredicted RBP18.4■□□□□ 0.54
SMARCAL1-208ENST00000434435 FCN1O00602 326 aa18.4■□□□□ 0.54
SMARCAL1-208ENST00000434435 SIX6O95475 246 aa18.4■□□□□ 0.54
SMARCAL1-208ENST00000434435 C9orf152Q5JTZ5 239 aa18.4■□□□□ 0.54
SMARCAL1-208ENST00000434435 ZNF429Q86V71 674 aa18.4■□□□□ 0.54
SMARCAL1-208ENST00000434435 ZBTB8BQ8NAP8 495 aaPredicted RBP18.4■□□□□ 0.54
SMARCAL1-208ENST00000434435 PDCD10Q9BUL8 212 aa18.4■□□□□ 0.54
SMARCAL1-208ENST00000434435 QTRT1Q9BXR0 403 aaKnown RBP18.4■□□□□ 0.54
SMARCAL1-208ENST00000434435 OR51B2Q9Y5P1 312 aa18.4■□□□□ 0.54
SMARCAL1-208ENST00000434435 IGHV7-81A0A0B4J1V7 117 aa18.39■□□□□ 0.53
SMARCAL1-208ENST00000434435 TRIM77I1YAP6 450 aa18.39■□□□□ 0.53
SMARCAL1-208ENST00000434435 CNIH1O95406 144 aa18.39■□□□□ 0.53
SMARCAL1-208ENST00000434435 COMPP49747 757 aaPredicted RBP18.39■□□□□ 0.53
SMARCAL1-208ENST00000434435 ZNF562Q6V9R5 426 aa18.39■□□□□ 0.53
SMARCAL1-208ENST00000434435 OR11H7Q8NGC8 314 aa18.39■□□□□ 0.53
SMARCAL1-208ENST00000434435 HSPB9Q9BQS6 159 aa18.39■□□□□ 0.53
SMARCAL1-208ENST00000434435 PRSS22Q9GZN4 317 aa18.39■□□□□ 0.53
SMARCAL1-208ENST00000434435 CACFD1Q9UGQ2 172 aa18.39■□□□□ 0.53
SMARCAL1-208ENST00000434435 ZNF257Q9Y2Q1 563 aa18.39■□□□□ 0.53
SMARCAL1-208ENST00000434435 A0A1B0GVG6 124 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 FAM181BA6NEQ2 426 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 ST8SIA3O43173 380 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 PITX3O75364 302 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 MYOD1P15172 320 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 RPL27AP46776 148 aaKnown RBP18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 BLCAPP62952 87 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 CX3CL1P78423 397 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 FXYD3Q14802 87 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 AARDQ4LEZ3 155 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 OR1L8Q8NGR8 309 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 OR5B3Q8NH48 314 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 ARPC1AQ92747 370 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 GSKIPQ9P0R6 139 aa18.38■□□□□ 0.53
SMARCAL1-208ENST00000434435 HMX3A6NHT5 357 aa18.37■□□□□ 0.53
SMARCAL1-208ENST00000434435 KCNAB3O43448 404 aa18.37■□□□□ 0.53
SMARCAL1-208ENST00000434435 CRYBA1P05813 215 aa18.37■□□□□ 0.53
SMARCAL1-208ENST00000434435 CXCL3P19876 107 aa18.37■□□□□ 0.53
SMARCAL1-208ENST00000434435 SSBP2P81877 361 aaPredicted RBP18.37■□□□□ 0.53
SMARCAL1-208ENST00000434435 C10orf55Q5SWW7 151 aa18.37■□□□□ 0.53
SMARCAL1-208ENST00000434435 OR4D5Q8NGN0 318 aa18.37■□□□□ 0.53
SMARCAL1-208ENST00000434435 ABHD5Q8WTS1 349 aa18.37■□□□□ 0.53
SMARCAL1-208ENST00000434435 SRSF12Q8WXF0 261 aaKnown RBP18.37■□□□□ 0.53
SMARCAL1-208ENST00000434435 TEX50A0A1B0GTY4 177 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 FAM90A26D6RGX4 464 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 NXPH3O95157 252 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 IFNA17P01571 189 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 IGHG2P01859 326 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 OPN1MWP04001 364 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 OPN1MW2P0DN77 364 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 OPN1MW3P0DN78 364 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 H2BFSP57053 126 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 HSPE1P61604 102 aaKnown RBP18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 CYCSP99999 105 aaKnown RBP18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 NDPQ00604 133 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 SLC35E3Q7Z769 313 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 OR52E5Q8NH55 327 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 GRPEL2Q8TAA5 225 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 PARP11Q9NR21 331 aa18.36■□□□□ 0.53
SMARCAL1-208ENST00000434435 TRAPPC2P0DI81 140 aa18.35■□□□□ 0.53
SMARCAL1-208ENST00000434435 TRAPPC2BP0DI82 140 aa18.35■□□□□ 0.53
SMARCAL1-208ENST00000434435 SPCS3P61009 180 aa18.35■□□□□ 0.53
SMARCAL1-208ENST00000434435 ARSJQ5FYB0 599 aaPredicted RBP18.35■□□□□ 0.53
SMARCAL1-208ENST00000434435 FYTTD1Q96QD9 318 aaKnown RBP18.35■□□□□ 0.53
SMARCAL1-208ENST00000434435 HINT2Q9BX68 163 aa18.35■□□□□ 0.53
SMARCAL1-208ENST00000434435 NMES1Q9C002 83 aa18.35■□□□□ 0.53
SMARCAL1-208ENST00000434435 ZNF702PQ9H963 129 aa18.35■□□□□ 0.53
SMARCAL1-208ENST00000434435 HSPB7Q9UBY9 170 aa18.35■□□□□ 0.53
SMARCAL1-208ENST00000434435 ATP6V0E1O15342 81 aa18.34■□□□□ 0.53
SMARCAL1-208ENST00000434435 SCGB1D2O95969 90 aa18.34■□□□□ 0.53
SMARCAL1-208ENST00000434435 NKX2-1P43699 371 aaPredicted RBP18.34■□□□□ 0.53
SMARCAL1-208ENST00000434435 BCAP31P51572 246 aa18.34■□□□□ 0.53
SMARCAL1-208ENST00000434435 PRCDQ00LT1 54 aa18.34■□□□□ 0.53
SMARCAL1-208ENST00000434435 TNFRSF9Q07011 255 aa18.34■□□□□ 0.53
SMARCAL1-208ENST00000434435 ZNF436Q9C0F3 470 aaPredicted RBP18.34■□□□□ 0.53
SMARCAL1-208ENST00000434435 MED6O75586 246 aa18.33■□□□□ 0.52
SMARCAL1-208ENST00000434435 PDLIM3Q53GG5 364 aaPredicted RBP18.33■□□□□ 0.52
SMARCAL1-208ENST00000434435 CXorf66Q5JRM2 361 aaPredicted RBP18.33■□□□□ 0.52
SMARCAL1-208ENST00000434435 Q6ZS46 218 aa18.33■□□□□ 0.52
SMARCAL1-208ENST00000434435 ASB13Q8WXK3 278 aa18.33■□□□□ 0.52
SMARCAL1-208ENST00000434435 PLEKHA3Q9HB20 300 aa18.33■□□□□ 0.52
SMARCAL1-208ENST00000434435 NDUFA4L2Q9NRX3 87 aa18.33■□□□□ 0.52
SMARCAL1-208ENST00000434435 CUBNO60494 3623 aa18.33■□□□□ 0.52
SMARCAL1-208ENST00000434435 A0A1W2PN81 502 aa18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 CEBPZOSA8MTT3 80 aa18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 E7EUB6 86 aa18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 WRBO00258 174 aa18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 GIPP09681 153 aaPredicted RBP18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 CHRNA7P36544 502 aa18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 HOXA1P49639 335 aaPredicted RBP18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 SRSF4Q08170 494 aaKnown RBP18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 SPINK9Q5DT21 86 aa18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 MRPL41Q8IXM3 137 aaKnown RBP18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 Q8N2B8 174 aa18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 SGMS2Q8NHU3 365 aa18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 CHAC2Q8WUX2 184 aa18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 FAM103A1Q9BTL3 118 aaKnown RBP18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 ENY2Q9NPA8 101 aa18.32■□□□□ 0.52
SMARCAL1-208ENST00000434435 NIPBLQ6KC79 2804 aaeCLIP18.31■□□□□ 0.52
SMARCAL1-208ENST00000434435 MSGN1A6NI15 193 aa18.31■□□□□ 0.52
SMARCAL1-208ENST00000434435 CGB1A6NKQ9 187 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms