RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 IGLL1P15814 213 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 SRD5A2P31213 254 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 GPR6P46095 362 aaPredicted RBP9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 TRIP6Q15654 476 aaKnown RBP9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 EFNB3Q15768 340 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 OR10J3Q5JRS4 329 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 SCCPDHQ8NBX0 429 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 PHF7Q9BWX1 381 aaPredicted RBP9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 CDC42EP3Q9UKI2 254 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 ARL2-SNX15V9GYD0 113 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 MED12LQ86YW9 2145 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 OR5B21A6NL26 309 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 OR10J4P0C629 311 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 PSG1P11464 419 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 OPRK1P41145 380 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 CX3CL1P78423 397 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 ZNF718Q3SXZ3 478 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 MPV17L2Q567V2 206 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 KCNE4Q8WWG9 221 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 PLEKHA3Q9HB20 300 aa9.61□□□□□ -0.87
HMGCS1-202ENST00000433297 TRAV9-1A0A075B6T8 112 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 H0Y8G0 127 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 J3QT63 122 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 SSTR5P35346 364 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 OR4A47Q6IF82 309 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 TXNDC17Q9BRA2 123 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 MPC1Q9Y5U8 109 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 DOCK10Q96BY6 2186 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 TRBV9A0A0B4J1U6 114 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 IGHV2-70DA0A0C4DH43 119 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 OR7C2O60412 319 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 TOMM40O96008 361 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 MT-ND6P03923 174 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 CAMPP49913 170 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 DUSP3P51452 185 aaPredicted RBP9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 RHOBP62745 196 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 SSPNQ14714 243 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 GCNT2Q8N0V5 402 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 FAM216AQ8WUB2 273 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 C12orf49Q9H741 205 aa9.6□□□□□ -0.87
HMGCS1-202ENST00000433297 WNT9BO14905 357 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 COX6A1P12074 109 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 SLAQ13239 276 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 PMCHL1Q16048 86 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 IBA57Q5T440 356 aaKnown RBP9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 MRPL14Q6P1L8 145 aaKnown RBP9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 MIR17HGQ75NE6 70 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 STPG3Q8N7X2 389 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 POM121L2Q96KW2 1035 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 HSD17B10Q99714 261 aaKnown RBP9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 MRPS16Q9Y3D3 137 aaKnown RBP9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 MT-CO3P00414 261 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 AMY1AP04745 511 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 P0C879 139 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 C19orf35Q6ZS72 473 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 ZNF826PQ6ZT77 177 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 FAM122AQ96E09 287 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 IMMP1LQ96LU5 166 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 TAAR6Q96RI8 345 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 SSBP4Q9BWG4 385 aaPredicted RBP9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 CLEC5AQ9NY25 188 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 TRAV9-2A0A087WT02 112 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 TRGV10A0A0A0MS01 117 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 IGHV2-26A0A0B4J1V2 119 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 DNPH1O43598 174 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 NUDT3O95989 172 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 RPL8P62917 257 aaKnown RBP9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 SMIM15Q7Z3B0 74 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 ZC2HC1AQ96GY0 325 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 DCTN5Q9BTE1 182 aa9.59□□□□□ -0.87
HMGCS1-202ENST00000433297 TRAV3A0A0B4J244 114 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 IGLC7A0M8Q6 106 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 OR2T8A6NH00 312 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 HAND1O96004 215 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 GATA2P23769 480 aaPredicted RBP9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 EDDM3AQ14507 147 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 PRR27Q6MZM9 219 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 EBLN2Q6P2I7 272 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 WDR86Q86TI4 376 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 FAM168AQ92567 244 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 RTL8AQ9BWD3 113 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 MBNL3Q9NUK0 354 aaKnown RBP9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 TMEM30CPA0ZSE6 113 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 HLA-DQA1P01909 254 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 MFAP2P55001 183 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 CLDN18P56856 261 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 ALKBH6Q3KRA9 238 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 AMMECR1LQ6DCA0 310 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 OR2D3Q8NGH3 330 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 C18orf32Q8TCD1 76 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 CST9LQ9H4G1 147 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 GP6Q9HCN6 339 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 NPVFQ9HCQ7 196 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 YLPM1P49750 1951 aaKnown RBP9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 IGHV1-69-2A0A0G2JMI3 117 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 ZNF891A8MT65 544 aaPredicted RBP9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 AHRRA9YTQ3 701 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 MPDU1O75352 247 aa9.58□□□□□ -0.88
HMGCS1-202ENST00000433297 KIR3DL3Q8N743 410 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms