RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 CCL28Q9NRJ3 127 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 TRPM6Q9BX84 2022 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 UBR3Q6ZT12 1888 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 IGHV3OR16-13A0A075B7E8 117 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 TMSB15BA0A087X1C1 80 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 IGHV3-74A0A0B4J1X5 117 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 MSGN1A6NI15 193 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 PDGFAP04085 211 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 STAG3L2P0CL84 134 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 GLIPR1P48060 266 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 GAS1P54826 345 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 JOSD1Q15040 202 aaPredicted RBP3.77□□□□□ -1.81
LRRK2-204ENST00000430804 EFNB3Q15768 340 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 LINC00469Q8N7U9 141 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 PIFOQ8TCI5 191 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 VN1R17PQ8TDU5 208 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 FGF20Q9NP95 211 aaPredicted RBP3.77□□□□□ -1.81
LRRK2-204ENST00000430804 NDUFA12Q9UI09 145 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 FAM186AA6NE01 2351 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 SPTBN2O15020 2390 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 IGHV3-49A0A0A0MS15 119 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 C5orf52A6NGY3 159 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 FOXI3A8MTJ6 420 aaPredicted RBP3.77□□□□□ -1.81
LRRK2-204ENST00000430804 PRR32B1ATL7 298 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 ZIC3O60481 467 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 APOC3P02656 99 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 CD37P11049 281 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 CDKN1BP46527 198 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 RPL15P61313 204 aaKnown RBP3.77□□□□□ -1.81
LRRK2-204ENST00000430804 ACTL10Q5JWF8 245 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 TMEM52Q8NDY8 209 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 DNAJC4Q9NNZ3 241 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 IL36RNQ9UBH0 155 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 GPR132Q9UNW8 380 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 A8MWL6 223 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 CTDSP2O14595 271 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 RBFOX2O43251 390 aaKnown RBP eCLIP3.77□□□□□ -1.81
LRRK2-204ENST00000430804 IGHV3-23P01764 117 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 ERGP11308 486 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 PSG7Q13046 419 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 OTPQ5XKR4 325 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 SIGLEC15Q6ZMC9 328 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 C1QL2Q7Z5L3 287 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 ODF3L1Q8IXM7 274 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 NKAPP1Q8N9T2 125 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 AQP3Q92482 292 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 DAZ1Q9NQZ3 744 aaKnown RBP3.77□□□□□ -1.81
LRRK2-204ENST00000430804 GAB2Q9UQC2 676 aa3.77□□□□□ -1.81
LRRK2-204ENST00000430804 IGHV2-26A0A0B4J1V2 119 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 ZAR1LA6NP61 321 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 INAFM1C9JVW0 142 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 CRLF1O75462 422 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 CST7O76096 145 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 PLAUP00749 431 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 MBPP02686 304 aaPredicted RBP3.76□□□□□ -1.81
LRRK2-204ENST00000430804 PPIFP30405 207 aaKnown RBP3.76□□□□□ -1.81
LRRK2-204ENST00000430804 RPS10P46783 165 aaKnown RBP3.76□□□□□ -1.81
LRRK2-204ENST00000430804 PQLC2Q6ZP29 291 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 TMEM123Q8N131 208 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 PARP16Q8N5Y8 322 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 RNASEH2CQ8TDP1 164 aaKnown RBP3.76□□□□□ -1.81
LRRK2-204ENST00000430804 GATA6Q92908 595 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 SLX1AQ9BQ83 275 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 TAF1LQ8IZX4 1826 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 SVILO95425 2214 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 BRWD3Q6RI45 1802 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 E7EQL1 145 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 F8W735 103 aaPredicted RBP3.76□□□□□ -1.81
LRRK2-204ENST00000430804 VENTXO95231 258 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 FGF8P55075 233 aaPredicted RBP3.76□□□□□ -1.81
LRRK2-204ENST00000430804 DLK1P80370 383 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 FBLN7Q53RD9 439 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 DHRS11Q6UWP2 260 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 NDUFA11Q86Y39 141 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 SRSF12Q8WXF0 261 aaKnown RBP3.76□□□□□ -1.81
LRRK2-204ENST00000430804 RAB37Q96AX2 223 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 CSAG2Q9Y5P2 127 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 TRAV39A0A0B4J263 110 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 MAP1LC3B2A6NCE7 125 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 EFNA2O43921 213 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 ATP5LO75964 103 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 SOD3P08294 240 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 ZFP36P26651 326 aaKnown RBP3.76□□□□□ -1.81
LRRK2-204ENST00000430804 NTF4P34130 210 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 SYNJ2BPP57105 145 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 LOXL1Q08397 574 aaPredicted RBP3.76□□□□□ -1.81
LRRK2-204ENST00000430804 KIAA0141Q14154 515 aaPredicted RBP3.76□□□□□ -1.81
LRRK2-204ENST00000430804 S100A7L2Q5SY68 101 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 PRSS45Q7RTY3 260 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 MAP1LC3BQ9GZQ8 125 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 EMCNQ9ULC0 261 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 TCRBV3S1A0A5B6 114 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 TMEM218A2RU14 115 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 UBE2CO00762 179 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 CA2P00918 260 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 CFHR2P36980 270 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 IRF3Q14653 427 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 PIGYQ3MUY2 71 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 RASL11AQ6T310 242 aa3.76□□□□□ -1.81
LRRK2-204ENST00000430804 ZNF329Q86UD4 541 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms