RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 TGIF2LXQ8IUE1 241 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 OR2T10Q8NGZ9 312 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 OCC1Q8TAD7 63 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 PINX1Q96BK5 328 aaKnown RBP5.91□□□□□ -1.46
COL28A1-202ENST00000430711 PARD6GQ9BYG4 376 aaPredicted RBP5.91□□□□□ -1.46
COL28A1-202ENST00000430711 IFI27L2Q9H2X8 130 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 POLDIP2Q9Y2S7 368 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 POLR3KQ9Y2Y1 108 aaPredicted RBP5.91□□□□□ -1.46
COL28A1-202ENST00000430711 TIMM9Q9Y5J7 89 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 PKDREJQ9NTG1 2253 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 PCNX1Q96RV3 2341 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 IGKV1OR2-108A0A075B7D4 117 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 IGHV1-18A0A0C4DH31 117 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 ZNF320A2RRD8 509 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 OOEPA6NGQ2 149 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 FAM90A26D6RGX4 464 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 TMEM250H0YL14 139 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 M0R1X1 148 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 DVL1O14640 695 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 TIMM8AO60220 97 aaPredicted RBP5.91□□□□□ -1.46
COL28A1-202ENST00000430711 ACTL6BO94805 426 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 CD1BP29016 333 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 PDLIM4P50479 330 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 UBE2NP61088 152 aaKnown RBP5.91□□□□□ -1.46
COL28A1-202ENST00000430711 SLC35B1P78383 322 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 RELBQ01201 579 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 SRSF1Q07955 248 aaKnown RBP eCLIP5.91□□□□□ -1.46
COL28A1-202ENST00000430711 GUSBP1Q15486 140 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 MORN5Q5VZ52 161 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 SLC35E4Q6ICL7 350 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 SEM1Q6ZVN7 128 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 GCSAMQ8N6F7 178 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 FDCSPQ8NFU4 85 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 OR2Z1Q8NG97 314 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 ACTR3CQ9C0K3 210 aaPredicted RBP5.91□□□□□ -1.46
COL28A1-202ENST00000430711 CTDSP1Q9GZU7 261 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 KCNIP1Q9NZI2 227 aa5.91□□□□□ -1.46
COL28A1-202ENST00000430711 CELSR1Q9NYQ6 3014 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 A6NNC1 897 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 RAB29O14966 203 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 FCN3O75636 299 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 IGKV3-15P01624 115 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 IGHV3-48P01763 117 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 COX5AP20674 150 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 ACSF3Q4G176 576 aaPredicted RBP5.9□□□□□ -1.46
COL28A1-202ENST00000430711 OXLD1Q5BKU9 147 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 COA6Q5JTJ3 125 aaKnown RBP5.9□□□□□ -1.46
COL28A1-202ENST00000430711 RUSC1-AS1Q66K80 236 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 VHLLQ6RSH7 139 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 OR5R1Q8NH85 324 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 SGMS2Q8NHU3 365 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 SNHG12Q9BXW3 62 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 MRPL37Q9BZE1 423 aaKnown RBP5.9□□□□□ -1.46
COL28A1-202ENST00000430711 KLF13Q9Y2Y9 288 aaPredicted RBP5.9□□□□□ -1.46
COL28A1-202ENST00000430711 PXMP4Q9Y6I8 212 aa5.9□□□□□ -1.46
COL28A1-202ENST00000430711 IGHV2OR16-5A0A0B4J2B6 119 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 MKRN2OSH3BPM6 223 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 IFNA1P01562 189 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 IFNA10P01566 189 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 IGFBP2P18065 325 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 TNFSF10P50591 281 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 CCL11P51671 97 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 SSBP2P81877 361 aaPredicted RBP5.9□□□□□ -1.47
COL28A1-202ENST00000430711 ZNF718Q3SXZ3 478 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 MORN2Q502X0 79 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 KRTCAP3Q53RY4 240 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 PRAMEF5Q5TYX0 476 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 Q6ZWC4 215 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 Q71RC1 249 aaPredicted RBP5.9□□□□□ -1.47
COL28A1-202ENST00000430711 MIR17HGQ75NE6 70 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 GBGT1Q8N5D6 347 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 RNASEH2CQ8TDP1 164 aaKnown RBP5.9□□□□□ -1.47
COL28A1-202ENST00000430711 ZNF503Q96F45 646 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 MANBALQ9NQG1 85 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 TMEM140Q9NV12 185 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 ELOVL5Q9NYP7 299 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 DKK4Q9UBT3 224 aa5.9□□□□□ -1.47
COL28A1-202ENST00000430711 KLRC4-KLRK1H3BQV0 150 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 CGAP01215 116 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 PRDX2P32119 198 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 PRB3Q04118 309 aaPredicted RBP5.89□□□□□ -1.47
COL28A1-202ENST00000430711 Q6ZT83 130 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 FAM214BQ7L5A3 538 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 MOGAT3Q86VF5 341 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 Q8IYB0 196 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 ZCCHC24Q8N2G6 241 aaKnown RBP5.89□□□□□ -1.47
COL28A1-202ENST00000430711 FAM216AQ8WUB2 273 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 NINJ1Q92982 152 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 GMPPAQ96IJ6 420 aaPredicted RBP5.89□□□□□ -1.47
COL28A1-202ENST00000430711 OR5B12Q96R08 314 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 TAAR6Q96RI8 345 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 DIRC2Q96SL1 478 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 GNG12Q9UBI6 72 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 POLEQ07864 2286 aa5.89□□□□□ -1.47
COL28A1-202ENST00000430711 VPS13CQ709C8 3753 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 SAA2-SAA4A0A096LPE2 208 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 SRRM4A7MD48 611 aaKnown RBP5.88□□□□□ -1.47
COL28A1-202ENST00000430711 E7EUB6 86 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 TNFSF13O75888 250 aa5.88□□□□□ -1.47
COL28A1-202ENST00000430711 CA1P00915 261 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms