RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 NQO2P16083 231 aa13.17□□□□□ -0.3
UBE3D-204ENST00000430071 VDAC1P21796 283 aa13.17□□□□□ -0.3
UBE3D-204ENST00000430071 CDX1P47902 265 aaPredicted RBP13.17□□□□□ -0.3
UBE3D-204ENST00000430071 PRSS8Q16651 343 aa13.17□□□□□ -0.3
UBE3D-204ENST00000430071 OR4A47Q6IF82 309 aa13.17□□□□□ -0.3
UBE3D-204ENST00000430071 TMED4Q7Z7H5 227 aa13.17□□□□□ -0.3
UBE3D-204ENST00000430071 MYOZ3Q8TDC0 251 aa13.17□□□□□ -0.3
UBE3D-204ENST00000430071 ZNF430Q9H8G1 570 aaPredicted RBP13.17□□□□□ -0.3
UBE3D-204ENST00000430071 ARPC1BO15143 372 aaKnown RBP13.16□□□□□ -0.3
UBE3D-204ENST00000430071 SOX15O60248 233 aa13.16□□□□□ -0.3
UBE3D-204ENST00000430071 KRASP01116 189 aa13.16□□□□□ -0.3
UBE3D-204ENST00000430071 SERPINE2P07093 398 aa13.16□□□□□ -0.3
UBE3D-204ENST00000430071 OR5AC1P0C628 307 aa13.16□□□□□ -0.3
UBE3D-204ENST00000430071 AKR1C4P17516 323 aa13.16□□□□□ -0.3
UBE3D-204ENST00000430071 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
UBE3D-204ENST00000430071 ASAH1Q13510 395 aa13.16□□□□□ -0.3
UBE3D-204ENST00000430071 ZNF562Q6V9R5 426 aa13.16□□□□□ -0.3
UBE3D-204ENST00000430071 TMEM167AQ8TBQ9 72 aa13.16□□□□□ -0.3
UBE3D-204ENST00000430071 OR5B12Q96R08 314 aa13.16□□□□□ -0.3
UBE3D-204ENST00000430071 FLVCR2Q9UPI3 526 aa13.16□□□□□ -0.3
UBE3D-204ENST00000430071 TRAV3A0A0B4J244 114 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 MARCH11A6NNE9 402 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 KBTBD11O94819 623 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 OR2A4O95047 310 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 DUS4LO95620 317 aaKnown RBP13.15□□□□□ -0.3
UBE3D-204ENST00000430071 IGLV1-40P01703 118 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 IL6RP08887 468 aaPredicted RBP13.15□□□□□ -0.3
UBE3D-204ENST00000430071 UCP1P25874 307 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 SLC6A1P30531 599 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 G6PCP35575 357 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 GNB1P62873 340 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 C19orf54Q5BKX5 351 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 ASPHD1Q5U4P2 390 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 ZNF491Q8N8L2 437 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 DMBX1Q8NFW5 382 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 VSTM2AQ8TAG5 236 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 GLYATL2Q8WU03 294 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 OR2A7Q96R45 310 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 AIFM2Q9BRQ8 373 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 GON7Q9BXV9 100 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 TMEM222Q9H0R3 208 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 TMEM140Q9NV12 185 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 ZNF580Q9UK33 172 aa13.15□□□□□ -0.3
UBE3D-204ENST00000430071 TRAV41A0A0B4J266 112 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 FXYD3Q14802 87 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 ECSCRQ19T08 205 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 DEFB121Q5J5C9 76 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 C10orf55Q5SWW7 151 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 SGPP2Q8IWX5 399 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 CENPSQ8N2Z9 138 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 LHFPL5Q8TAF8 219 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 GALNT14Q96FL9 552 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 FAM103A1Q9BTL3 118 aaKnown RBP13.14□□□□□ -0.31
UBE3D-204ENST00000430071 ALX4Q9H161 411 aaPredicted RBP13.14□□□□□ -0.31
UBE3D-204ENST00000430071 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 PRR13Q9NZ81 148 aa13.14□□□□□ -0.31
UBE3D-204ENST00000430071 I3L521 148 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 UPK2O00526 184 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 B3GALNT1O75752 331 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 IGKV1-5P01602 117 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 ERVK-16P61578 105 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 DHODHQ02127 395 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 TNXAQ16473 311 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 TRIM16LQ309B1 348 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 TMEM128Q5BJH2 165 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 SLC25A42Q86VD7 318 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 MMD2Q8IY49 270 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 MINDY2Q8NBR6 621 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 GRPEL2Q8TAA5 225 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 C4orf3Q8WVX3 66 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 ARPC1AQ92747 370 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 TSC22D3Q99576 134 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 NUBP2Q9Y5Y2 271 aa13.13□□□□□ -0.31
UBE3D-204ENST00000430071 CNIH1O95406 144 aa13.12□□□□□ -0.31
UBE3D-204ENST00000430071 CDS2O95674 445 aa13.12□□□□□ -0.31
UBE3D-204ENST00000430071 TCRBP04435 133 aa13.12□□□□□ -0.31
UBE3D-204ENST00000430071 OR9G9P0C7N8 305 aa13.12□□□□□ -0.31
UBE3D-204ENST00000430071 MYOD1P15172 320 aa13.12□□□□□ -0.31
UBE3D-204ENST00000430071 RAB9AP51151 201 aa13.12□□□□□ -0.31
UBE3D-204ENST00000430071 CRIP2P52943 208 aaPredicted RBP13.12□□□□□ -0.31
UBE3D-204ENST00000430071 FHL3Q13643 280 aa13.12□□□□□ -0.31
UBE3D-204ENST00000430071 TMEM187Q14656 261 aa13.12□□□□□ -0.31
UBE3D-204ENST00000430071 OR11H1Q8NG94 326 aa13.12□□□□□ -0.31
UBE3D-204ENST00000430071 OR4A5Q8NH83 315 aa13.12□□□□□ -0.31
UBE3D-204ENST00000430071 ABHD5Q8WTS1 349 aa13.12□□□□□ -0.31
UBE3D-204ENST00000430071 A0A1W2PN81 502 aa13.11□□□□□ -0.31
UBE3D-204ENST00000430071 CREBL2O60519 120 aaPredicted RBP13.11□□□□□ -0.31
UBE3D-204ENST00000430071 P0C879 139 aa13.11□□□□□ -0.31
UBE3D-204ENST00000430071 ANXA7P20073 488 aaKnown RBP13.11□□□□□ -0.31
UBE3D-204ENST00000430071 CHRNA7P36544 502 aa13.11□□□□□ -0.31
UBE3D-204ENST00000430071 RPL8P62917 257 aaKnown RBP13.11□□□□□ -0.31
UBE3D-204ENST00000430071 PPP1R1AQ13522 171 aa13.11□□□□□ -0.31
UBE3D-204ENST00000430071 IZUMO4Q1ZYL8 232 aa13.11□□□□□ -0.31
UBE3D-204ENST00000430071 MZT2BQ6NZ67 158 aa13.11□□□□□ -0.31
UBE3D-204ENST00000430071 SELENOHQ8IZQ5 122 aaKnown RBP13.11□□□□□ -0.31
UBE3D-204ENST00000430071 CADM3Q8N126 398 aa13.11□□□□□ -0.31
UBE3D-204ENST00000430071 TMEM56Q96MV1 263 aa13.11□□□□□ -0.31
UBE3D-204ENST00000430071 C20orf85Q9H1P6 137 aa13.11□□□□□ -0.31
UBE3D-204ENST00000430071 KCNIP3Q9Y2W7 256 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms