RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 HSD17B13Q7Z5P4 300 aaPredicted RBP11.72□□□□□ -0.53
GARNL3-204ENST00000429629 ZNF429Q86V71 674 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 NDUFA11Q86Y39 141 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 LRTM2Q8N967 370 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 OR5B3Q8NH48 314 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 LSM10Q969L4 123 aaKnown RBP11.72□□□□□ -0.53
GARNL3-204ENST00000429629 TMEM14BQ9NUH8 114 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 LINC00527Q9UJ94 153 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 TBC1D24Q9ULP9 559 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 ZNF257Q9Y2Q1 563 aa11.72□□□□□ -0.53
GARNL3-204ENST00000429629 DUXBA0A1W2PPF3 345 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 G3V318 75 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 TCRBP04435 133 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 RPL27AP46776 148 aaKnown RBP11.71□□□□□ -0.53
GARNL3-204ENST00000429629 MECP2P51608 486 aaKnown RBP11.71□□□□□ -0.53
GARNL3-204ENST00000429629 OR2B8PP59922 312 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 IFITM3Q01628 133 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 KLK9Q2XQG4 91 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 AARDQ4LEZ3 155 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 UNQ5815/PRO19632Q6UWF5 114 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 TMED4Q7Z7H5 227 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 ZNF329Q86UD4 541 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 ZNF695Q8IW36 515 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 SELENOHQ8IZQ5 122 aaKnown RBP11.71□□□□□ -0.53
GARNL3-204ENST00000429629 LGI3Q8N145 548 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 TTC9CQ8N5M4 171 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 DUSP18Q8NEJ0 188 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 LFNGQ8NES3 379 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 MYOZ3Q8TDC0 251 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 RRNAD1Q96FB5 475 aaKnown RBP11.71□□□□□ -0.53
GARNL3-204ENST00000429629 COMMD5Q9GZQ3 224 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 SLA2Q9H6Q3 261 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 KLK9Q9UKQ9 250 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 TSSC4Q9Y5U2 329 aaPredicted RBP11.71□□□□□ -0.53
GARNL3-204ENST00000429629 WSB1Q9Y6I7 421 aa11.71□□□□□ -0.53
GARNL3-204ENST00000429629 ANK2Q01484 3957 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 DNHD1Q96M86 4753 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 A0A0B4J2A0 478 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 FAM240BA0A1B0GVZ2 78 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 SFT2D2O95562 160 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 IGKV1-5P01602 117 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 CD28P10747 220 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 CDX1P47902 265 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-204ENST00000429629 DEFA1P59665 94 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 DEFA3P59666 94 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 GNB1P62873 340 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 CXorf66Q5JRM2 361 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-204ENST00000429629 OR1L8Q8NGR8 309 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 GRPEL2Q8TAA5 225 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 CITED2Q99967 270 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-204ENST00000429629 SHPKQ9UHJ6 478 aa11.7□□□□□ -0.54
GARNL3-204ENST00000429629 TRAV3A0A0B4J244 114 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 TEX50A0A1B0GTY4 177 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 TCRBV4S1A1TA0A5B7 111 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 C15orf61A6NNL5 157 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 NPIPB5A8MRT5 1133 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 TEX22C9J3V5 150 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 CRYGCP07315 174 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 OR9G9P0C7N8 305 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 HSPE1P61604 102 aaKnown RBP11.69□□□□□ -0.54
GARNL3-204ENST00000429629 SRSF4Q08170 494 aaKnown RBP11.69□□□□□ -0.54
GARNL3-204ENST00000429629 ASPHD1Q5U4P2 390 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 TMEM65Q6PI78 240 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 OR4A16Q8NH70 328 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 FAM110DQ8TAY7 271 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-204ENST00000429629 ABHD5Q8WTS1 349 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 FAM103A1Q9BTL3 118 aaKnown RBP11.69□□□□□ -0.54
GARNL3-204ENST00000429629 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
GARNL3-204ENST00000429629 PALMDQ9NP74 551 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 NDUFA4L2Q9NRX3 87 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 COA4Q9NYJ1 87 aa11.69□□□□□ -0.54
GARNL3-204ENST00000429629 A0A0B4J293 547 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 A0A1W2PN81 502 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 INS-IGF2F8WCM5 200 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 M0QZ24 198 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 SOX15O60248 233 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 DUS4LO95620 317 aaKnown RBP11.68□□□□□ -0.54
GARNL3-204ENST00000429629 TRAPPC2P0DI81 140 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 TRAPPC2BP0DI82 140 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 CHRNA7P36544 502 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 RAB9AP51151 201 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 AKR1C2P52895 323 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 RAB25P57735 213 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 PPP1R1AQ13522 171 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 KIAA0141Q14154 515 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-204ENST00000429629 ECSCRQ19T08 205 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 TMEM268Q5VZI3 342 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 C10orf99Q6UWK7 81 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 OR52E5Q8NH55 327 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 LHFPL5Q8TAF8 219 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 UBE2E2Q96LR5 201 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 PHB2Q99623 299 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-204ENST00000429629 FLVCR2Q9UPI3 526 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 OR51B2Q9Y5P1 312 aa11.68□□□□□ -0.54
GARNL3-204ENST00000429629 A0A1B0GW64 132 aa11.67□□□□□ -0.54
GARNL3-204ENST00000429629 C9orf170A2RU37 121 aa11.67□□□□□ -0.54
GARNL3-204ENST00000429629 ADARB2-AS1A8MUL3 147 aa11.67□□□□□ -0.54
GARNL3-204ENST00000429629 E7EUB6 86 aa11.67□□□□□ -0.54
GARNL3-204ENST00000429629 DHFRP00374 187 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms